RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 TMEM129A0AVI4 362 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 NAP1L6A6NFF2 107 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 BHLHE40O14503 412 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 ELAVL4P26378 380 aaKnown RBP8.13□□□□□ -1.11
SF3B2-216ENST00000534765 OR12D2P58182 307 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 TRA2BP62995 288 aaKnown RBP8.13□□□□□ -1.11
SF3B2-216ENST00000534765 VAMP2P63027 116 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 PSG6Q00889 435 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 THEM4Q5T1C6 240 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 HIST2H3PS2Q5TEC6 136 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 LANCL3Q6ZV70 420 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 SPICQ8N5J4 248 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 SMIM4Q8WVI0 70 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 GHSRQ92847 366 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 TSLPQ969D9 159 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 ZNF764Q96H86 408 aaPredicted RBP8.13□□□□□ -1.11
SF3B2-216ENST00000534765 PLA2G12AQ9BZM1 189 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 POFUT1Q9H488 388 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 ZMAT3Q9HA38 289 aaKnown RBP8.13□□□□□ -1.11
SF3B2-216ENST00000534765 EXOGQ9Y2C4 368 aaKnown RBP8.13□□□□□ -1.11
SF3B2-216ENST00000534765 ADAM18Q9Y3Q7 739 aa8.13□□□□□ -1.11
SF3B2-216ENST00000534765 ARL6IP5O75915 188 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 AHSA1O95433 338 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 MAS1P04201 325 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 UBE2KP61086 200 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 TSPAN31Q12999 210 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 VWA2Q5GFL6 755 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 HACD4Q5VWC8 232 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 C16orf47Q6ZP98 133 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-216ENST00000534765 MOB3CQ70IA8 216 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 CD163Q86VB7 1156 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 BAP18Q8IXM2 172 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 SNX22Q96L94 193 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 OR14A2Q96R54 314 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 SEBOXQ9HB31 216 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-216ENST00000534765 APMAPQ9HDC9 416 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ADAP2Q9NPF8 381 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 SEMA4GQ9NTN9 838 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ZNF727A8MUV8 499 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 GEMIN2O14893 280 aaKnown RBP8.12□□□□□ -1.11
SF3B2-216ENST00000534765 SCGB1D2O95969 90 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 BMP7P18075 431 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 MMP11P24347 488 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ACKR3P25106 362 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ITPKBP27987 946 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 TSFMP43897 325 aaKnown RBP8.12□□□□□ -1.11
SF3B2-216ENST00000534765 MMP15P51511 669 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 GUCA2AQ02747 115 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 KLF9Q13886 244 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ELOCQ15369 112 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ZNF630Q2M218 657 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-216ENST00000534765 PRPF38BQ5VTL8 546 aaKnown RBP8.12□□□□□ -1.11
SF3B2-216ENST00000534765 NIPAL3Q6P499 406 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 NKAIN4Q8IVV8 208 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 LRRC25Q8N386 305 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-216ENST00000534765 SPACA7Q96KW9 195 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 G6PC3Q9BUM1 346 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 NELFAQ9H3P2 528 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 NEUROD4Q9HD90 331 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 UPB1Q9UBR1 384 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 PILRBQ9UKJ0 227 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 APC2O95996 2303 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 OR5H15A6NDH6 313 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 OR5H1A6NKK0 313 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 DUXAA6NLW8 204 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 MASP2O00187 686 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 CSNK2A2P19784 350 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-216ENST00000534765 IFNGR2P38484 337 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ALDH3B1P43353 468 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 CDX1P47902 265 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-216ENST00000534765 SULT1A1P50225 295 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 EMDP50402 254 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ZNF322Q6U7Q0 402 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-216ENST00000534765 Q6ZRG5 221 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ACOT7LQ6ZUV0 252 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 GJD3Q8N144 294 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 TMEM99Q8N816 258 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 OR52L1Q8NGH7 329 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ZBTB8AQ96BR9 441 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ZNF607Q96SK3 696 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 NEU1Q99519 415 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 FBXL4Q9UKA2 621 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 SPTA1P02549 2419 aa8.12□□□□□ -1.11
SF3B2-216ENST00000534765 ZNF354AO60765 605 aaPredicted RBP8.11□□□□□ -1.11
SF3B2-216ENST00000534765 LRP3O75074 770 aa8.11□□□□□ -1.11
SF3B2-216ENST00000534765 SFTPBP07988 381 aa8.11□□□□□ -1.11
SF3B2-216ENST00000534765 ERCC1P07992 297 aaPredicted RBP8.11□□□□□ -1.11
SF3B2-216ENST00000534765 SAGP10523 405 aaPredicted RBP8.11□□□□□ -1.11
SF3B2-216ENST00000534765 RPA2P15927 270 aa8.11□□□□□ -1.11
SF3B2-216ENST00000534765 MPGP29372 298 aa8.11□□□□□ -1.11
SF3B2-216ENST00000534765 APLNRP35414 380 aa8.11□□□□□ -1.11
SF3B2-216ENST00000534765 PTTG1IPP53801 180 aa8.11□□□□□ -1.11
SF3B2-216ENST00000534765 LSM6P62312 80 aaKnown RBP8.11□□□□□ -1.11
SF3B2-216ENST00000534765 KHDC3LQ587J8 217 aa8.11□□□□□ -1.11
SF3B2-216ENST00000534765 ARSJQ5FYB0 599 aaPredicted RBP8.11□□□□□ -1.11
SF3B2-216ENST00000534765 PMS2CLQ68D20 193 aa8.11□□□□□ -1.11
SF3B2-216ENST00000534765 FAM185AQ8N0U4 392 aa8.11□□□□□ -1.11
SF3B2-216ENST00000534765 ZNF283Q8N7M2 679 aa8.11□□□□□ -1.11
SF3B2-216ENST00000534765 MORN4Q8NDC4 146 aa8.11□□□□□ -1.11
SF3B2-216ENST00000534765 MITD1Q8WV92 249 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms