RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 EIF3KQ9UBQ5 218 aaKnown RBP10.28□□□□□ -0.76
COMMD9-208ENST00000533643 PLEKHB1Q9UF11 243 aaPredicted RBP10.28□□□□□ -0.76
COMMD9-208ENST00000533643 STARD10Q9Y365 291 aa10.28□□□□□ -0.76
COMMD9-208ENST00000533643 RNF115Q9Y4L5 304 aa10.28□□□□□ -0.76
COMMD9-208ENST00000533643 N6AMT1Q9Y5N5 214 aa10.28□□□□□ -0.76
COMMD9-208ENST00000533643 R4GMQ9 66 aa10.28□□□□□ -0.76
COMMD9-208ENST00000533643 FAM221AA4D161 298 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 LOC110117498-PIK3R3F6TDL0 507 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 MYL12BO14950 172 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 SMPD2O60906 423 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 LALBAP00709 142 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 ANXA2P07355 339 aaKnown RBP10.27□□□□□ -0.77
COMMD9-208ENST00000533643 FAM157BP0CG42 384 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 PCMT1P22061 227 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 RAD52P43351 418 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 RGS6P49758 472 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 GBX2P52951 348 aaPredicted RBP10.27□□□□□ -0.77
COMMD9-208ENST00000533643 WNT4P56705 351 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 NKX6-1P78426 367 aaPredicted RBP10.27□□□□□ -0.77
COMMD9-208ENST00000533643 EMX1Q04741 257 aaPredicted RBP10.27□□□□□ -0.77
COMMD9-208ENST00000533643 SNAI3Q3KNW1 292 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 ADAM5Q6NVV9 412 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 FDX2Q6P4F2 183 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 ARL9Q6T311 187 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 FAM57BQ71RH2 274 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 CATSPERDQ86XM0 798 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 KLBQ86Z14 1044 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 PRSS35Q8N3Z0 413 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 KBTBD8Q8NFY9 601 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 TSPAN14Q8NG11 270 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 OR2G2Q8NGZ5 317 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 LILRB1Q8NHL6 650 aaPredicted RBP10.27□□□□□ -0.77
COMMD9-208ENST00000533643 ABHD4Q8TB40 342 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 NEUROG1Q92886 237 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 APOBEC3DQ96AK3 386 aaPredicted RBP10.27□□□□□ -0.77
COMMD9-208ENST00000533643 POFUT1Q9H488 388 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 ACOT13Q9NPJ3 140 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 G6PC2Q9NQR9 355 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 ZNF319Q9P2F9 582 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 SLC22A13Q9Y226 551 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 SPEF1Q9Y4P9 236 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 SNX5Q9Y5X3 404 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 ICE1Q9Y2F5 2266 aa10.27□□□□□ -0.77
COMMD9-208ENST00000533643 CADP27708 2225 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 DCHS2Q6V1P9 2916 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 J3QW42 95 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 GPRIN2O60269 458 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 GOSR1O95249 250 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 KIR3DL2P43630 455 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 TGM4P49221 684 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 GTF2A1P52655 376 aaPredicted RBP10.26□□□□□ -0.77
COMMD9-208ENST00000533643 NANOS3P60323 173 aaKnown RBP10.26□□□□□ -0.77
COMMD9-208ENST00000533643 ERVS71-1P61550 626 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 PPP1CBP62140 327 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 MRPL28Q13084 256 aaKnown RBP10.26□□□□□ -0.77
COMMD9-208ENST00000533643 SNTB2Q13425 540 aaKnown RBP10.26□□□□□ -0.77
COMMD9-208ENST00000533643 SPHARQ15513 63 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 TBCEQ15813 527 aaPredicted RBP10.26□□□□□ -0.77
COMMD9-208ENST00000533643 XAF1Q6GPH4 301 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 ZNF704Q6ZNC4 412 aaPredicted RBP10.26□□□□□ -0.77
COMMD9-208ENST00000533643 ELMOD2Q8IZ81 293 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 ZNF295-AS1Q8N0V1 137 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 SVOPQ8N4V2 548 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 NUP37Q8NFH4 326 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 OR8B12Q8NGG6 310 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 OR1J1Q8NGS3 322 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 PGAM5Q96HS1 289 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 BCL2L14Q9BZR8 327 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 PBOV1Q9GZY1 135 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 SP140LQ9H930 580 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 FRRS1LQ9P0K9 344 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 NUFIP1Q9UHK0 495 aaKnown RBP10.26□□□□□ -0.77
COMMD9-208ENST00000533643 OR52A1Q9UKL2 312 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 GTF2A1LQ9UNN4 478 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 SIRT4Q9Y6E7 314 aaPredicted RBP10.26□□□□□ -0.77
COMMD9-208ENST00000533643 ATP23Q9Y6H3 246 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 HRNRQ86YZ3 2850 aaPredicted RBP10.26□□□□□ -0.77
COMMD9-208ENST00000533643 DOPEY2Q9Y3R5 2298 aa10.26□□□□□ -0.77
COMMD9-208ENST00000533643 A0A087WXM4 84 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 A0A1W2PPR1 153 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 TRIM64CA6NLI5 447 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 OR4C45A6NMZ5 311 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 E7EQL1 145 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 OGG1O15527 345 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 TBX1O43435 398 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 CTAG2O75638 210 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 LCKP06239 509 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 THBS4P35443 961 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 GLRXP35754 106 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 CCR9P51686 369 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 ACSM1Q08AH1 577 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 ALKBH1Q13686 389 aaKnown RBP10.25□□□□□ -0.77
COMMD9-208ENST00000533643 MSMPQ1L6U9 139 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 ZNF672Q499Z4 452 aaPredicted RBP10.25□□□□□ -0.77
COMMD9-208ENST00000533643 CCDC58Q4VC31 144 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 WDR38Q5JTN6 314 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 GLYATL3Q5SZD4 288 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 SPATA46Q5T0L3 261 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 BCL2L15Q5TBC7 163 aa10.25□□□□□ -0.77
COMMD9-208ENST00000533643 UNQ6126/PRO20091Q6UXV3 157 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms