RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SLC25A40Q8TBP6 338 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 ZNF418Q8TF45 676 aaPredicted RBP7.42□□□□□ -1.22
COPB1-210ENST00000533533 FAM216AQ8WUB2 273 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 SNX33Q8WV41 574 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 RDH5Q92781 318 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 GCDHQ92947 438 aaPredicted RBP7.42□□□□□ -1.22
COPB1-210ENST00000533533 INTS14Q96SY0 518 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 DDOQ99489 341 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 RBM4BQ9BQ04 359 aaKnown RBP7.42□□□□□ -1.22
COPB1-210ENST00000533533 OR2J1Q9GZK6 312 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 HDHD2Q9H0R4 259 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 GABARAPL1Q9H0R8 117 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 NARFLQ9H6Q4 476 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 WDR76Q9H967 626 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 LPAR2Q9HBW0 351 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 SLC25A19Q9HC21 320 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 HINT3Q9NQE9 182 aaKnown RBP7.42□□□□□ -1.22
COPB1-210ENST00000533533 H2AFY2Q9P0M6 372 aaPredicted RBP7.42□□□□□ -1.22
COPB1-210ENST00000533533 TAAR3PQ9P1P4 343 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 N6AMT1Q9Y5N5 214 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 COMMD3-BMI1R4GMX3 469 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 DOCK11Q5JSL3 2073 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 TMEM89A2RUT3 159 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 EI24O14681 340 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 WNT9BO14905 357 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 TPD52L2O43399 206 aaKnown RBP7.41□□□□□ -1.22
COPB1-210ENST00000533533 RGS9O75916 674 aaPredicted RBP7.41□□□□□ -1.22
COPB1-210ENST00000533533 GLCEO94923 617 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 NGFP01138 241 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 MT-ND5P03915 603 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 COX5BP10606 129 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 NAT2P11245 290 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 EPHA2P29317 976 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 GGT2P36268 569 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 NAA10P41227 235 aaPredicted RBP7.41□□□□□ -1.22
COPB1-210ENST00000533533 SLC6A9P48067 706 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 TMEM33P57088 247 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 HILS1P60008 231 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 MRPS11P82912 194 aaKnown RBP7.41□□□□□ -1.22
COPB1-210ENST00000533533 APOFQ13790 326 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 EIF2B1Q14232 305 aaKnown RBP7.41□□□□□ -1.22
COPB1-210ENST00000533533 ZIK1Q3SY52 487 aaPredicted RBP7.41□□□□□ -1.22
COPB1-210ENST00000533533 USP43Q70EL4 1123 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 PEG10Q86TG7 708 aaKnown RBP7.41□□□□□ -1.22
COPB1-210ENST00000533533 PQLC1Q8N2U9 271 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 CBR4Q8N4T8 237 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 TCEANCQ8N8B7 351 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 BBS1Q8NFJ9 593 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 OR51F2Q8NH61 342 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 PTP4A1Q93096 173 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 SPTSSAQ969W0 71 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 EME1Q96AY2 570 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 IL4I1Q96RQ9 567 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 COQ7Q99807 217 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 ATF6BQ99941 703 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 COPS4Q9BT78 406 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 OSBPL10Q9BXB5 764 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 NMNAT2Q9BZQ4 307 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 ZNF275Q9NSD4 429 aaPredicted RBP7.41□□□□□ -1.22
COPB1-210ENST00000533533 TREM2Q9NZC2 230 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 PTTG3PQ9NZH4 202 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 MYEF2Q9P2K5 600 aaKnown RBP7.41□□□□□ -1.22
COPB1-210ENST00000533533 CYB5R1Q9UHQ9 305 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 GPR160Q9UJ42 338 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 KCNG2Q9UJ96 466 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 PCDHB10Q9UN67 800 aa7.41□□□□□ -1.22
COPB1-210ENST00000533533 TRAV20A0A0B4J274 112 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 PLSCR5A0PG75 271 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 TRIM77I1YAP6 450 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 PPIHO43447 177 aaKnown RBP7.4□□□□□ -1.22
COPB1-210ENST00000533533 KCNAB3O43448 404 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 PRKYO43930 277 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 TIMM8AO60220 97 aaPredicted RBP7.4□□□□□ -1.22
COPB1-210ENST00000533533 SELENOFO60613 162 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 LCATP04180 440 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 MRPL3P09001 348 aaKnown RBP7.4□□□□□ -1.22
COPB1-210ENST00000533533 EPHA1P21709 976 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 HSD11B1P28845 292 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 POLR2IP36954 125 aaKnown RBP7.4□□□□□ -1.22
COPB1-210ENST00000533533 MPV17P39210 176 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 PRKXP51817 358 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 RAD23AP54725 363 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 TPTEP56180 551 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 LMO4P61968 165 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 HIST1H3AP68431 136 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 ECH1Q13011 328 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 MOGQ16653 247 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 HIST2H3PS2Q5TEC6 136 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 LCN1P1Q5VSP4 162 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 SLX4IPQ5VYV7 408 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 FAHD2BQ6P2I3 314 aaPredicted RBP7.4□□□□□ -1.22
COPB1-210ENST00000533533 C1orf229Q6ZS94 237 aaPredicted RBP7.4□□□□□ -1.22
COPB1-210ENST00000533533 ZBTB49Q6ZSB9 765 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 HIST2H3AQ71DI3 136 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 SHFQ7M4L6 423 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 DPY19L4Q7Z388 723 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 BCDIN3DQ7Z5W3 292 aaKnown RBP7.4□□□□□ -1.22
COPB1-210ENST00000533533 TEX29Q8N6K0 151 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 ZNF283Q8N7M2 679 aa7.4□□□□□ -1.22
COPB1-210ENST00000533533 OR5L1Q8NGL2 311 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms