RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 TMEM174Q8WUU8 243 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 OR8D1Q8WZ84 308 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 NTNG2Q96CW9 530 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 CPNE2Q96FN4 548 aaPredicted RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 MRAP2Q96G30 205 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 REEP6Q96HR9 211 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 TGM7Q96PF1 710 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 NPY6RQ99463 290 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 PARK7Q99497 189 aaKnown RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 WDR83Q9BRX9 315 aaKnown RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 RSG1Q9BU20 258 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 HINT2Q9BX68 163 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 FSD1LQ9BXM9 530 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 P2RY12Q9H244 342 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 ZDHHC6Q9H6R6 413 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 EGLN3Q9H6Z9 239 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 ZDHHC11Q9H8X9 412 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 RPF1Q9H9Y2 349 aaKnown RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 TMEM38BQ9NVV0 291 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 TMEM242Q9NWH2 141 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 MED29Q9NX70 200 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 B3GAT1Q9P2W7 334 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 COMMD3Q9UBI1 195 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 NAT8Q9UHE5 227 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 PACSIN3Q9UKS6 424 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 NEU3Q9UQ49 428 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 RASD1Q9Y272 281 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 LRP12Q9Y561 859 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 NUP153P49790 1475 aaKnown RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 TRAV26-1A0A087WT03 109 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 A0A0A6YYC8 382 aaPredicted RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 A0A1B0GW64 132 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 TVP23AA6NH52 213 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 FBLL1A6NHQ2 334 aaKnown RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 GLOD5A6NK44 160 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 FAM159BA6NKW6 160 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 HEPACAM2A8MVW5 462 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 I3L1I5 382 aaPredicted RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 MANBAO00462 879 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 ARPC2O15144 300 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 CTDSPLO15194 276 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 RBFOX2O43251 390 aaKnown RBP eCLIP4.89□□□□□ -1.63
CD44-236ENST00000533222 DUSP11O75319 330 aaKnown RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 SAP30O75446 220 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 REM1O75628 298 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 ADAP1O75689 374 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 TNFSF13O75888 250 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 TFP02787 698 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 FABP3P05413 133 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 CRYGBP07316 175 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 CD14P08571 375 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 OR8U9P0C7N5 309 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 CT45A8P0DMV1 189 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 CT45A9P0DMV2 189 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 FGF5P12034 268 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 SLC25A4P12235 298 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 HGFP14210 728 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 NCK1P16333 377 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 AKR1C4P17516 323 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 CXCL3P19876 107 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 MAOAP21397 527 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 CPT2P23786 658 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 KLRK1P26718 216 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 GABRR2P28476 465 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 S100GP29377 79 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 RBMS1P29558 406 aaKnown RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 SOAT1P35610 550 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 FOLR3P41439 243 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 GDF5P43026 501 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 ST8SIA6P61647 398 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 H3F3AP84243 136 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 SLC10A2Q12908 348 aaPredicted RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 ZNF154Q13106 437 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 PCLAFQ15004 111 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 CT45A2Q5DJT8 189 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 GCSAMLQ5JQS6 135 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 KIAA0895LQ68EN5 471 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 ADNP2Q6IQ32 1131 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 LCTLQ6UWM7 567 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 ALKAL2Q6UX46 152 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 ZNF730Q6ZMV8 503 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 PAQR9Q6ZVX9 377 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 SLC25A26Q70HW3 274 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 ADCK2Q7Z695 626 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 IFNEQ86WN2 208 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 ZNF444Q8N0Y2 327 aaPredicted RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 SLC35G3Q8N808 338 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 PNPLA1Q8N8W4 532 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 FADS6Q8N9I5 356 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 HJURPQ8NCD3 748 aaPredicted RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 OR2AK2Q8NG84 335 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 OR10G3Q8NGC4 313 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 OR1S2Q8NGQ3 325 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 LMO3Q8TAP4 145 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 RAB40AQ8WXH6 277 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 GPR146Q96CH1 333 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 C5orf30Q96GV9 206 aa4.89□□□□□ -1.63
CD44-236ENST00000533222 ZBTB45Q96K62 511 aaPredicted RBP4.89□□□□□ -1.63
CD44-236ENST00000533222 CAPNS2Q96L46 248 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms