RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 TSSK6Q9BXA6 273 aa19.74■□□□□ 0.75
SMPD1-209ENST00000533196 DDX28Q9NUL7 540 aaKnown RBP19.74■□□□□ 0.75
SMPD1-209ENST00000533196 M0R135 149 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 LCATP04180 440 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 HOXB6P17509 224 aaKnown RBP19.73■□□□□ 0.75
SMPD1-209ENST00000533196 PYCR1P32322 319 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 BLVRAP53004 296 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 MS4A2Q01362 244 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 ZMYND11Q15326 602 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 CYB561A3Q8NBI2 242 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 SEMA6DQ8NFY4 1073 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 OR2T33Q8NG76 320 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 OR10AD1Q8NGE0 317 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 ERGIC1Q969X5 290 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 ZNF799Q96GE5 643 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 LRGUKQ96M69 825 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 JMJD8Q96S16 334 aa19.73■□□□□ 0.75
SMPD1-209ENST00000533196 RBM4Q9BWF3 364 aaKnown RBP19.73■□□□□ 0.75
SMPD1-209ENST00000533196 NOP16Q9Y3C1 178 aaKnown RBP19.73■□□□□ 0.75
SMPD1-209ENST00000533196 LRRC30A6NM36 301 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 F5H0A9 414 aaPredicted RBP19.72■□□□□ 0.75
SMPD1-209ENST00000533196 MLNRO43193 412 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 T-ENOLP0DO92 83 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 RAP2AP10114 183 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 ZFP36P26651 326 aaKnown RBP19.72■□□□□ 0.75
SMPD1-209ENST00000533196 FMO3P31513 532 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 OTX1P32242 354 aaPredicted RBP19.72■□□□□ 0.75
SMPD1-209ENST00000533196 GATA4P43694 442 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 SLC6A9P48067 706 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 SLC25A1P53007 311 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 PCK2Q16822 640 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 CD300LDQ6UXZ3 194 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 PGAP1Q75T13 922 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 C1orf87Q8N0U7 546 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 NMNAT2Q9BZQ4 307 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 SLC22A4Q9H015 551 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 LRCH1Q9Y2L9 728 aa19.72■□□□□ 0.75
SMPD1-209ENST00000533196 VENTXO95231 258 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 IFNGP01579 166 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 HILS1P60008 231 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 DBPQ10586 325 aaPredicted RBP19.71■□□□□ 0.75
SMPD1-209ENST00000533196 PPP1R8Q12972 351 aaKnown RBP19.71■□□□□ 0.75
SMPD1-209ENST00000533196 TEX30Q5JUR7 227 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 DRAM2Q6UX65 266 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 ZNF771Q7L3S4 317 aaPredicted RBP19.71■□□□□ 0.75
SMPD1-209ENST00000533196 BHLHE23Q8NDY6 225 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 OR10S1Q8NGN2 331 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 SUCNR1Q9BXA5 334 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 WDR76Q9H967 626 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 TAS2R1Q9NYW7 299 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 OPN4Q9UHM6 478 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 COMMD3-BMI1R4GMX3 469 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 U3KQV3 271 aa19.71■□□□□ 0.75
SMPD1-209ENST00000533196 ARRDC5A6NEK1 342 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 TVP23AA6NH52 213 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 H0YL77 283 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 FSHBP01225 129 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 ENTPD1P49961 510 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 CRMP1Q14194 572 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 ESCO2Q56NI9 601 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 MRPL21Q7Z2W9 205 aaKnown RBP19.7■□□□□ 0.74
SMPD1-209ENST00000533196 NAA40Q86UY6 237 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 OR4Q3Q8NH05 313 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 ZNF420Q8TAQ5 688 aaPredicted RBP19.7■□□□□ 0.74
SMPD1-209ENST00000533196 ZNRF4Q8WWF5 429 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 SLCO4A1Q96BD0 722 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 VNN3Q9NY84 501 aa19.7■□□□□ 0.74
SMPD1-209ENST00000533196 CEACAM18A8MTB9 384 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 F5H5P2 479 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 SPI1P17947 270 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 CD200P41217 278 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 DCXRQ7Z4W1 244 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 OR10G2Q8NGC3 310 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 OR51L1Q8NGJ5 315 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 OR9Q1Q8NGQ5 310 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 Q8TCH9 128 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 SPRYD4Q8WW59 207 aaPredicted RBP19.69■□□□□ 0.74
SMPD1-209ENST00000533196 OPA3Q9H6K4 179 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 TMEM165Q9HC07 324 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 CMC2Q9NRP2 79 aa19.69■□□□□ 0.74
SMPD1-209ENST00000533196 AQP12BA6NM10 295 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 RIIAD1A6NNX1 92 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 TRIM77I1YAP6 450 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 WNT2P09544 360 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 ZNF12P17014 697 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 ZNF3P17036 446 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 ADRA2CP18825 462 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 FPR2P25090 351 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 RPS27P42677 84 aaKnown RBP19.68■□□□□ 0.74
SMPD1-209ENST00000533196 RAD23AP54725 363 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 HNRNPA0Q13151 305 aaKnown RBP19.68■□□□□ 0.74
SMPD1-209ENST00000533196 MOGAT3Q86VF5 341 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 AQP12AQ8IXF9 295 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.68■□□□□ 0.74
SMPD1-209ENST00000533196 DEFB108BQ8NET1 73 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 TEX47Q8TBZ9 253 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 GIPC3Q8TF64 312 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 KCNJ15Q99712 375 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 COPS4Q9BT78 406 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 ARMC1Q9NVT9 282 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms