RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ZNF587BE7ETH6 402 aa16.2■□□□□ 0.18
SMPD1-208ENST00000533123 ZNF254O75437 659 aa16.2■□□□□ 0.18
SMPD1-208ENST00000533123 PTTG1O95997 202 aa16.2■□□□□ 0.18
SMPD1-208ENST00000533123 ZNF84P51523 738 aa16.2■□□□□ 0.18
SMPD1-208ENST00000533123 IFITM2Q01629 132 aa16.2■□□□□ 0.18
SMPD1-208ENST00000533123 SGCAQ16586 387 aa16.2■□□□□ 0.18
SMPD1-208ENST00000533123 CATSPERDQ86XM0 798 aa16.2■□□□□ 0.18
SMPD1-208ENST00000533123 NCOA6Q14686 2063 aaPredicted RBP16.2■□□□□ 0.18
SMPD1-208ENST00000533123 A0A0B4J203 849 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 H2BFMP0C1H6 154 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 GUCA1AP43080 201 aaPredicted RBP16.19■□□□□ 0.18
SMPD1-208ENST00000533123 NKX2-5P52952 324 aaPredicted RBP16.19■□□□□ 0.18
SMPD1-208ENST00000533123 ZFP3Q96NJ6 502 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 GFI1Q99684 422 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 C1orf198Q9H425 327 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 BRD7Q9NPI1 651 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 MALT1Q9UDY8 824 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 R4GMQ9 66 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 ESPL1Q14674 2120 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 RER1O15258 196 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 PAHP00439 452 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 PRB1P04280 392 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 CRHP06850 196 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 B4GALT1P15291 398 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 ATF1P18846 271 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 CFL1P23528 166 aaKnown RBP16.19■□□□□ 0.18
SMPD1-208ENST00000533123 CCR9P51686 369 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 CASP6P55212 293 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 PPP3R1P63098 170 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 FOXB1Q99853 325 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 PLSCR4Q9NRQ2 329 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 C14orf119Q9NWQ9 140 aa16.19■□□□□ 0.18
SMPD1-208ENST00000533123 A0A0G2JNJ9 132 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 RPL36A-HNRNPH2H7BZ11 118 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 CA7P43166 264 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 NR4A2P43354 598 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 KCNMB1Q16558 191 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 FAM131AQ6UXB0 335 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.18■□□□□ 0.18
SMPD1-208ENST00000533123 LRRC18Q8N456 261 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 OR2AJ1Q8NGZ0 328 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 GPR148Q8TDV2 347 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 PHYHIPQ92561 330 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 NABP1Q96AH0 204 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 ZNF416Q9BWM5 594 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 NELFAQ9H3P2 528 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 TMEM38BQ9NVV0 291 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 Q9UFV3 132 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 PROCRQ9UNN8 238 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 TMEM269A0A1B0GVZ9 245 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 E9PLN8 166 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 CGAP01215 116 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 CTSSP25774 331 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 EIF2S3LQ2VIR3 472 aaKnown RBP16.18■□□□□ 0.18
SMPD1-208ENST00000533123 MZT2AQ6P582 158 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 CNIH2Q6PI25 160 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 FOXL2NBQ6ZUU3 175 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 ZNF610Q8N9Z0 462 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 CHAC2Q8WUX2 184 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 TSEN15Q8WW01 171 aaKnown RBP16.18■□□□□ 0.18
SMPD1-208ENST00000533123 TMEM106AQ96A25 262 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 VKORC1Q9BQB6 163 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 OPN3Q9H1Y3 402 aaPredicted RBP16.18■□□□□ 0.18
SMPD1-208ENST00000533123 G6PC2Q9NQR9 355 aa16.18■□□□□ 0.18
SMPD1-208ENST00000533123 KMT2BQ9UMN6 2715 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-208ENST00000533123 TRAV8-7A0A075B6U6 113 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 FABP12A6NFH5 140 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 NOTOA8MTQ0 251 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 EPXP11678 715 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 MSR1P21757 451 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 MRPS34P82930 218 aaKnown RBP16.17■□□□□ 0.18
SMPD1-208ENST00000533123 ARF1P84077 181 aaKnown RBP16.17■□□□□ 0.18
SMPD1-208ENST00000533123 TLE1Q04724 770 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 NDUFA5Q16718 116 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 DEGS2Q6QHC5 323 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 ZNF486Q96H40 463 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-208ENST00000533123 SRRQ9GZT4 340 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 MOV10Q9HCE1 1003 aaKnown RBP16.17■□□□□ 0.18
SMPD1-208ENST00000533123 OR52A1Q9UKL2 312 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 MEMO1Q9Y316 297 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 TRBV5-7A0A0A0MS05 114 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 BMP5P22003 454 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 MAPK3P27361 379 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-208ENST00000533123 C6orf183Q5T699 404 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 ZNF433Q8N7K0 673 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-208ENST00000533123 ACOT12Q8WYK0 555 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 DMRTA2Q96SC8 542 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 SFXN3Q9BWM7 321 aa16.17■□□□□ 0.18
SMPD1-208ENST00000533123 PNRC2Q9NPJ4 139 aaKnown RBP16.17■□□□□ 0.18
SMPD1-208ENST00000533123 A0A096LPE4 126 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 A0A1W2PPZ6 126 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 ITGA5P08648 1049 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 ADRA2CP18825 462 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 ELK1P19419 428 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 NPR2P20594 1047 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 IGFBP7Q16270 282 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 CCBE1Q6UXH8 406 aaPredicted RBP16.16■□□□□ 0.18
SMPD1-208ENST00000533123 ZNF813Q6ZN06 617 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 Q6ZT83 130 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 GDPD3Q7L5L3 318 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms