RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	GPM6A	P51674	278 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	KRTCAP3	Q53RY4	240 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	C9orf152	Q5JTZ5	239 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	C1orf185	Q5T7R7	199 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	LRRC28	Q86X40	367 aa	Predicted RBP	14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	OR2G2	Q8NGZ5	317 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	GOLGB1	Q14789	3259 aa	Known RBP	14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	SPINT2	O43291	252 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	MT-ND4	P03905	459 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	PTPN6	P29350	595 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	SLC35A2	P78381	396 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	PCK2	Q16822	640 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ZNF181	Q2M3W8	571 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	PLPPR5	Q32ZL2	321 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	RTL6	Q6ICC9	239 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	CCL17	Q92583	94 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	RNF32	Q9H0A6	362 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	PIKFYVE	Q9Y2I7	2098 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	SDK2	Q58EX2	2172 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	LYRM1	O43325	122 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	CREBL2	O60519	120 aa	Predicted RBP	14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	TNFSF8	P32971	234 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	HIKESHI	Q53FT3	197 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	TIPARP	Q7Z3E1	657 aa	Known RBP	14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ANGPTL4	Q9BY76	406 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	SLC26A1	Q9H2B4	701 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	TRBV5-3	A0A0A0MS03	114 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	TSPAN2	O60636	221 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ADGRE4P	Q86SQ3	457 aa		14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	LSR	Q86X29	649 aa	Predicted RBP	14.01	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ARPC3	O15145	178 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	TUSC2	O75896	110 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	LSM11	P83369	360 aa	Known RBP eCLIP	14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	BDH1	Q02338	343 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	NLRC3	Q7RTR2	1065 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	OR6X1	Q8NH79	312 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	BCO1	Q9HAY6	547 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	TRDV1	A0A1B0GX56	115 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	CDX4	O14627	284 aa	Predicted RBP	14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	CA6	P23280	308 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	CLVS2	Q5SYC1	327 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	SYS1	Q8N2H4	156 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	BPIFB2	Q8N4F0	458 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	MINDY2	Q8NBR6	621 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	CEPT1	Q9Y6K0	416 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	AQP7P3	A6NL99	342 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504		H3BMH7	237 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	PPIH	O43447	177 aa	Known RBP	14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	EIF5A	P63241	154 aa	Known RBP	14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	DBP	Q10586	325 aa	Predicted RBP	14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	MAB21L1	Q13394	359 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	AADACL3	Q5VUY0	350 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	FBXW12	Q6X9E4	464 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	PHC2	Q8IXK0	858 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	LSMEM1	Q8N8F7	131 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	OR56B2P	Q8NGI1	322 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	OR2S2	Q9NQN1	319 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ZNF224	Q9NZL3	707 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	RCE1	Q9Y256	329 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	KLK4	Q9Y5K2	254 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	COL6A6	A6NMZ7	2263 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	MEIKIN	A0A087WXM9	373 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ZNF816-ZNF321P	A0A0X1KG74	233 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	LOC100289279	A0A1B0GTE1	492 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	FAM221A	A4D161	298 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	C16orf97	H3BN30	126 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	WDR1	O75083	606 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	CCDC58	Q4VC31	144 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	CCBE1	Q6UXH8	406 aa	Predicted RBP	14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	CENPS	Q8N2Z9	138 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	OR1S1	Q8NH92	325 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	OIT3	Q8WWZ8	545 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	SF3B5	Q9BWJ5	86 aa	Known RBP	14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	PPA2	Q9H2U2	334 aa		14	□□□□□ -0.17
PPFIA1-222	ENST00000532504	SH2D1B	O14796	132 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	TAF9	Q16594	264 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	CDH24	Q86UP0	819 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ASB5	Q8WWX0	329 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ADAT1	Q9BUB4	502 aa	Known RBP	13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	RNF167	Q9H6Y7	350 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	NOX3	Q9HBY0	568 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ZNF355P	Q9NSJ1	428 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	FFAR1	O14842	300 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	HLA-DOB	P13765	273 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	RPA2	P15927	270 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	TNFRSF1A	P19438	455 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	TSC22D1	Q15714	1073 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ADIPOR1	Q96A54	375 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ZNF385A	Q96PM9	386 aa	Known RBP	13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	OR8B4	Q96RC9	309 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	RAB22A	Q9UL26	194 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ARPC1B	O15143	372 aa	Known RBP	13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	KLRB1	Q12918	225 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	CDK5R1	Q15078	307 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	RABL2B	Q9UNT1	228 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	ABCD4	O14678	606 aa		13.99	□□□□□ -0.17
PPFIA1-222	ENST00000532504	SPRY1	O43609	319 aa	Predicted RBP	13.99	□□□□□ -0.17

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