RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SPTBN1Q01082 2364 aaKnown RBP10.81□□□□□ -0.68
COPB1-208ENST00000532088 FAM221AA4D161 298 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 C5orf49A4QMS7 147 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 DEFB108AA8MXU0 73 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 PRR32B1ATL7 298 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 H3BSA7 217 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 CELA3BP08861 270 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 LOXP28300 417 aaPredicted RBP10.81□□□□□ -0.68
COPB1-208ENST00000532088 C21orf33P30042 268 aaPredicted RBP10.81□□□□□ -0.68
COPB1-208ENST00000532088 ETV1P50549 477 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 BSPH1Q075Z2 132 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 TBCEQ15813 527 aaPredicted RBP10.81□□□□□ -0.68
COPB1-208ENST00000532088 SP5Q6BEB4 398 aaPredicted RBP10.81□□□□□ -0.68
COPB1-208ENST00000532088 FDX2Q6P4F2 183 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 LRRN1Q6UXK5 716 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 LHFPL3Q86UP9 236 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 MYPOPQ86VE0 399 aaPredicted RBP10.81□□□□□ -0.68
COPB1-208ENST00000532088 NUP37Q8NFH4 326 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 PLPPR2Q96GM1 343 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 C4orf45Q96LM5 186 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 DOK1Q99704 481 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 MND1Q9BWT6 205 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 C1QTNF6Q9BXI9 259 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 BCL2L14Q9BZR8 327 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 IKZF2Q9UKS7 526 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 SPEF1Q9Y4P9 236 aa10.81□□□□□ -0.68
COPB1-208ENST00000532088 USP9XQ93008 2570 aaPredicted RBP10.81□□□□□ -0.68
COPB1-208ENST00000532088 A6NNC1 897 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 MYL12BO14950 172 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 SRSF10O75494 262 aaKnown RBP10.8□□□□□ -0.68
COPB1-208ENST00000532088 MT-ND5P03915 603 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 CD3EP07766 207 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 RPSAP08865 295 aaKnown RBP10.8□□□□□ -0.68
COPB1-208ENST00000532088 ADRA2AP08913 450 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 GSTP1P09211 210 aaKnown RBP10.8□□□□□ -0.68
COPB1-208ENST00000532088 COX6B1P14854 86 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 EEF1B2P24534 225 aaKnown RBP10.8□□□□□ -0.68
COPB1-208ENST00000532088 CALCRP30988 508 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 RAD52P43351 418 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 GATA4P43694 442 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 TGM4P49221 684 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 RPS23P62266 143 aaKnown RBP10.8□□□□□ -0.68
COPB1-208ENST00000532088 GALK2Q01415 458 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 BDH1Q02338 343 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 MVKQ03426 396 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 ACSM1Q08AH1 577 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 SNTB1Q13884 538 aaKnown RBP10.8□□□□□ -0.68
COPB1-208ENST00000532088 CCDC58Q4VC31 144 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 LIPNQ5VXI9 398 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 ADAM5Q6NVV9 412 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 ZNF544Q6NX49 715 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 ZNF773Q6PK81 442 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 PRSS45Q7RTY3 260 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 ZNF283Q8N7M2 679 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 NANOGP1Q8N7R0 232 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 YIPF7Q8N8F6 280 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 ZNF485Q8NCK3 441 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 OR52H1Q8NGJ2 320 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 APOBEC3DQ96AK3 386 aaPredicted RBP10.8□□□□□ -0.68
COPB1-208ENST00000532088 OPA3Q9H6K4 179 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 ERVK-18Q9QC07 812 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 ZNF391Q9UJN7 358 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 RNF115Q9Y4L5 304 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 R4GMQ9 66 aa10.8□□□□□ -0.68
COPB1-208ENST00000532088 ANKHD1Q8IWZ3 2542 aaKnown RBP10.79□□□□□ -0.68
COPB1-208ENST00000532088 F5H5K5 113 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 ABCD4O14678 606 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 SMPD2O60906 423 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 HTR1AP08908 422 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 DBHP09172 617 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 NR4A1P22736 598 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 GLRXP35754 106 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 WNT5AP41221 380 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 CX3CR1P49238 355 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 CCR9P51686 369 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 GBX2P52951 348 aaPredicted RBP10.79□□□□□ -0.68
COPB1-208ENST00000532088 UCP2P55851 309 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 WNT4P56705 351 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 TAS2R43P59537 309 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 NKX6-1P78426 367 aaPredicted RBP10.79□□□□□ -0.68
COPB1-208ENST00000532088 PAQR4Q8N4S7 273 aaPredicted RBP10.79□□□□□ -0.68
COPB1-208ENST00000532088 OR5L1Q8NGL2 311 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 RPS4Y2Q8TD47 263 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 C14orf79Q96F83 325 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 PELI1Q96FA3 418 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 C4orf36Q96KX1 117 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 RGCCQ9H4X1 137 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 ZNF442Q9H7R0 627 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 ISYNA1Q9NPH2 558 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 FAM206AQ9NX38 181 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 NUFIP1Q9UHK0 495 aaKnown RBP10.79□□□□□ -0.68
COPB1-208ENST00000532088 CLEC2DQ9UHP7 191 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 GNG8Q9UK08 70 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 SNX5Q9Y5X3 404 aa10.79□□□□□ -0.68
COPB1-208ENST00000532088 A0A087WXM4 84 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 A0A0U1RQV5 110 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 TMEM269A0A1B0GVZ9 245 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 A1L4Q6 167 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 SHISA9B4DS77 424 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 J3QLW9 94 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms