RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 OR14K1Q8NGZ2 314 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF480Q8WV37 535 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 AQP3Q92482 292 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 ZMYND19Q96E35 227 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 ACY3Q96HD9 319 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 NMNAT2Q9BZQ4 307 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 C20orf141Q9NUB4 165 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 SEMA5BQ9P283 1151 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF346Q9UL40 294 aaKnown RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF443Q9Y2A4 671 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 PRSS47A8MTI9 375 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 ETV2O00321 342 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 SMAD9O15198 467 aaKnown RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 ABHD16AO95870 558 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 BCKDHBP21953 392 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 TNFSF10P50591 281 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 RASGEF1BQ0VAM2 473 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 LASP1Q14847 261 aaKnown RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 SHHQ15465 462 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 TMEM176BQ3YBM2 270 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 EIPR1Q53HC9 387 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 NCR3LG1Q68D85 454 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 ARMC6Q6NXE6 501 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 WDR88Q6ZMY6 472 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 MTSS1LQ765P7 747 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 FAM129CQ86XR2 697 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF584Q8IVC4 421 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 OR5L2Q8NGL0 311 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 FAM174AQ8TBP5 190 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 RNASE8Q8TDE3 154 aaKnown RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 OR7D2Q96RA2 312 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF2Q9BSG1 426 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 IL36AQ9UHA7 158 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF727A8MUV8 499 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 CST2P09228 141 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 PBX2P40425 430 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 OR1G1P47890 313 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 GABRA4P48169 554 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 MMP16P51512 607 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 EGR3Q06889 387 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 ARHGAP19Q14CB8 494 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 CLEC2AQ6UVW9 174 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 C17orf64Q86WR6 236 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 PFN4Q8NHR9 129 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 STT3BQ8TCJ2 826 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 CDS1Q92903 461 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 ZG16BQ96DA0 208 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 BPIFA2Q96DR5 249 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 TVP23CQ96ET8 276 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 C20orf144Q9BQM9 153 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 MS4A8Q9BY19 250 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 AICDAQ9GZX7 198 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 FRRS1LQ9P0K9 344 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 GTF2A1LQ9UNN4 478 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 PUS1Q9Y606 427 aaKnown RBP eCLIP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 A0A0U1RQV5 110 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 TMEM212A6NML5 194 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 FTCDNL1E5RQL4 147 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 CA11O75493 328 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 HMGN2P05204 90 aaKnown RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 GSTP1P09211 210 aaKnown RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 THEGLP0DJG4 465 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 FUT1P19526 365 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 HNF1AP20823 631 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 AFF3P51826 1226 aaKnown RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 UBE2KP61086 200 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 SP3Q02447 781 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 FOXF1Q12946 379 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 LEMD1Q68G75 181 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 FAM160A2Q8N612 972 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 LILRA3Q8N6C8 439 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 OR51F2Q8NH61 342 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 GAL3ST4Q96RP7 486 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 PCGF1Q9BSM1 259 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 MENTQ9BUN1 341 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 TCEAL2Q9H3H9 227 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-214ENST00000530886 FBXL17Q9UF56 701 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 SLC25A13Q9UJS0 675 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 MEMO1Q9Y316 297 aa7.28□□□□□ -1.24
CSDE1-214ENST00000530886 VCANP13611 3396 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 SCN5AQ14524 2016 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 A0A087WV48 116 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 NKX6-3A6NJ46 265 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 OR4C45A6NMZ5 311 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 A6NNC1 897 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 MASP2O00187 686 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 SIAH2O43255 324 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 STC2O76061 302 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 GJB5O95377 273 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 GYPBP06028 91 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 OR4A8P0C604 315 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF28P17035 718 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 GATMP50440 423 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 SLC25A1P53007 311 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 KLF3P57682 345 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-214ENST00000530886 RAB32Q13637 225 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 HMGN2P46Q86SG4 172 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 CYB561A3Q8NBI2 242 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 BHLHE23Q8NDY6 225 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 SEMA6DQ8NFY4 1073 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms