RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 ZNF620Q6ZNG0 422 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 FKBP9P1Q75LS8 142 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 TSEN54Q7Z6J9 526 aaKnown RBP12.39□□□□□ -0.43
CAPN1-219ENST00000530495 C19orf18Q8NEA5 215 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 KIF17Q9P2E2 1029 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 GMPR2Q9P2T1 348 aaKnown RBP12.39□□□□□ -0.43
CAPN1-219ENST00000530495 RPS6KA6Q9UK32 745 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 TMCC3Q9ULS5 477 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 POLR1DQ9Y2S0 133 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 A0A1W2PRQ8 180 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 DCTN6O00399 190 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 CXCR6O00574 342 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 FAM20BO75063 409 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 TOX4O94842 621 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 ACSM4P0C7M7 580 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 MMP9P14780 707 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 OMPP47874 163 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 CENPAP49450 140 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 RPS6KA3P51812 740 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 FXYD6P3P58550 94 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 DGCR6Q14129 220 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 PDCD1Q15116 288 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 MPPED2Q15777 294 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 NAA40Q86UY6 237 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 CYP4Z1Q86W10 505 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 SLC15A3Q8IY34 581 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 TBC1D15Q8TC07 691 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 SSMEM1Q8WWF3 244 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 DYRK2Q92630 601 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 TSSK2Q96PF2 358 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 TBX15Q96SF7 602 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 ACOXLQ9NUZ1 547 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 ARMCX1Q9P291 453 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 ERVK-18Q9QC07 812 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 CTSZQ9UBR2 303 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 B9D1Q9UPM9 204 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 ENPP4Q9Y6X5 453 aa12.38□□□□□ -0.43
CAPN1-219ENST00000530495 NOTCH1P46531 2555 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 IGLV1-36A0A0B4J1U3 117 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 PPP1R3DO95685 299 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 MDH1P40925 334 aaKnown RBP12.37□□□□□ -0.43
CAPN1-219ENST00000530495 PRSS12P56730 875 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 LIPEQ05469 1076 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 ECH1Q13011 328 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 MALLQ13021 153 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 KCNJ8Q15842 424 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 ASPHD2Q6ICH7 369 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 DNM1P34Q6PK57 102 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 CFAP77Q6ZQR2 320 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 ARPINQ7Z6K5 226 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-219ENST00000530495 OR6V1Q8N148 313 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 PNLDC1Q8NA58 520 aaKnown RBP12.37□□□□□ -0.43
CAPN1-219ENST00000530495 SLC26A10Q8NG04 563 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 LINC01006Q8NI28 216 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 GATAD2BQ8WXI9 593 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 SLCO4A1Q96BD0 722 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 HSH2DQ96JZ2 352 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 WDFY2Q96P53 400 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 TECTBQ96PL2 329 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 RBM4BQ9BQ04 359 aaKnown RBP12.37□□□□□ -0.43
CAPN1-219ENST00000530495 TRIM15Q9C019 465 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 SRA1Q9HD15 236 aaKnown RBP12.37□□□□□ -0.43
CAPN1-219ENST00000530495 UFSP2Q9NUQ7 469 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 RNF7Q9UBF6 113 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 RNF114Q9Y508 228 aa12.37□□□□□ -0.43
CAPN1-219ENST00000530495 WNK1Q9H4A3 2382 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 IGHV1-69DA0A0B4J2H0 117 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 F5H5K5 113 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 LGALS8O00214 317 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 GSTA4O15217 222 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 NDUFA2O43678 99 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 CLPXO76031 633 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 PTBP3O95758 552 aaKnown RBP12.36□□□□□ -0.43
CAPN1-219ENST00000530495 SERPINA1P01009 418 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 IGHV1-69P01742 117 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 LCATP04180 440 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 H1F0P07305 194 aaKnown RBP12.36□□□□□ -0.43
CAPN1-219ENST00000530495 TROVE2P10155 538 aaKnown RBP eCLIP12.36□□□□□ -0.43
CAPN1-219ENST00000530495 HOXA4Q00056 320 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-219ENST00000530495 PRAMEF6Q5VXH4 476 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 SFRP4Q6FHJ7 346 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-219ENST00000530495 SLC18B1Q6NT16 456 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 PGAP1Q75T13 922 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 PLPP7Q8NBV4 271 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 SPRYD4Q8WW59 207 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-219ENST00000530495 RCN3Q96D15 328 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 RSRC1Q96IZ7 334 aaKnown RBP12.36□□□□□ -0.43
CAPN1-219ENST00000530495 PITX2Q99697 317 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 ATF6BQ99941 703 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 SLC22A4Q9H015 551 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 SIRPDQ9H106 197 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 FN3KRPQ9HA64 309 aa12.36□□□□□ -0.43
CAPN1-219ENST00000530495 UNC119BA6NIH7 251 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 GMDSO60547 372 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 CA6P23280 308 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 IER3P46695 156 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 PROK1P58294 105 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 TRAP1Q12931 704 aaKnown RBP12.35□□□□□ -0.43
CAPN1-219ENST00000530495 OR8G1Q15617 311 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms