RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 CDRT15Q96T59 188 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 TMEM165Q9HC07 324 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 IL1RAPQ9NPH3 570 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 NDE1Q9NXR1 346 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 ZNF69Q9UC07 566 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 IGHV3-64DA0A0J9YX35 117 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 A0A1B0GWJ7 208 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 ATP8B1O43520 1251 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 ZNF205O95201 554 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 FSTL3O95633 263 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 GGT2P36268 569 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 AWAT1Q58HT5 328 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 KLF17Q5JT82 389 aaPredicted RBP17.51■□□□□ 0.39
SMPD1-204ENST00000530395 C16orf89Q6UX73 402 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 LRRN1Q6UXK5 716 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 PGAP1Q75T13 922 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 ZDHHC21Q8IVQ6 265 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 CELF2-AS1Q8N7Q2 184 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 OR8B3Q8NGG8 313 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 OR11L1Q8NGX0 322 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 SGMS2Q8NHU3 365 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 SPRYD4Q8WW59 207 aaPredicted RBP17.51■□□□□ 0.39
SMPD1-204ENST00000530395 SPTSSAQ969W0 71 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 ERGIC1Q969X5 290 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 OR8B2Q96RD0 313 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 CD300AQ9UGN4 299 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 TAGLN3Q9UI15 199 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 NOP16Q9Y3C1 178 aaKnown RBP17.51■□□□□ 0.39
SMPD1-204ENST00000530395 CDH10Q9Y6N8 788 aa17.51■□□□□ 0.39
SMPD1-204ENST00000530395 KRT36O76013 467 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 HLA-DPB1P04440 258 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 PPIAL4GP0DN37 164 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 GATA4P43694 442 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 RAD23AP54725 363 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 PAX8Q06710 450 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 ZNF404Q494X3 552 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 SPATS1Q496A3 300 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 CLEC12AQ5QGZ9 265 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 SLC35F1Q5T1Q4 408 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 PGBD2Q6P3X8 592 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 MRPL21Q7Z2W9 205 aaKnown RBP17.5■□□□□ 0.39
SMPD1-204ENST00000530395 LINC00471Q8N535 108 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 PROKR2Q8NFJ6 384 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 SLCO4A1Q96BD0 722 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 TMEM246Q9BRR3 403 aa17.5■□□□□ 0.39
SMPD1-204ENST00000530395 MS4A7Q9GZW8 240 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-204ENST00000530395 PNRC2Q9NPJ4 139 aaKnown RBP17.5■□□□□ 0.39
SMPD1-204ENST00000530395 IGHV2-70DA0A0C4DH43 119 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 DNAJC9-AS1A6NH13 148 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 M0R135 149 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 PRTN3P24158 256 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 CD80P33681 288 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 PRSS12P56730 875 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 MXRA7P84157 204 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 DBPQ10586 325 aaPredicted RBP17.49■□□□□ 0.39
SMPD1-204ENST00000530395 FOXL1Q12952 345 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 BAMBIQ13145 260 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 TUSC1Q2TAM9 212 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 PARP8Q8N3A8 854 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 OR2T4Q8NH00 348 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 RAB40AQ8WXH6 277 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 ZNF799Q96GE5 643 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 SLC22A4Q9H015 551 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 EGLN3Q9H6Z9 239 aa17.49■□□□□ 0.39
SMPD1-204ENST00000530395 MRPL22Q9NWU5 206 aaKnown RBP17.49■□□□□ 0.39
SMPD1-204ENST00000530395 MGAM2Q2M2H8 2515 aa17.48■□□□□ 0.39
SMPD1-204ENST00000530395 SPRY1O43609 319 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-204ENST00000530395 HKR1P10072 659 aa17.48■□□□□ 0.39
SMPD1-204ENST00000530395 CD200P41217 278 aa17.48■□□□□ 0.39
SMPD1-204ENST00000530395 MTNR1AP48039 350 aa17.48■□□□□ 0.39
SMPD1-204ENST00000530395 PITPNBP48739 271 aa17.48■□□□□ 0.39
SMPD1-204ENST00000530395 DCDC5Q6ZRR9 648 aa17.48■□□□□ 0.39
SMPD1-204ENST00000530395 NAA40Q86UY6 237 aa17.48■□□□□ 0.39
SMPD1-204ENST00000530395 BCL6BQ8N143 479 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-204ENST00000530395 OR4C15Q8NGM1 316 aa17.48■□□□□ 0.39
SMPD1-204ENST00000530395 Q8TCH9 128 aa17.48■□□□□ 0.39
SMPD1-204ENST00000530395 MAP6Q96JE9 813 aa17.48■□□□□ 0.39
SMPD1-204ENST00000530395 CLN8Q9UBY8 286 aa17.48■□□□□ 0.39
SMPD1-204ENST00000530395 TNFRSF11BO00300 401 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 DCTN3O75935 186 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 PYCR1P32322 319 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 PMELP40967 661 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 PAX2Q02962 417 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 MAB21L1Q13394 359 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 OR8G1Q15617 311 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 DEFB107AQ8IZN7 70 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 CYB561A3Q8NBI2 242 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 UPRTQ96BW1 309 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 DUX5Q96PT3 197 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 ARL8BQ9NVJ2 186 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 ARL2BPQ9Y2Y0 163 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 LYVE1Q9Y5Y7 322 aa17.47■□□□□ 0.39
SMPD1-204ENST00000530395 PKD1L1Q8TDX9 2849 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 BHLHE40O14503 412 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 PHYHO14832 338 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 IGHV4-38-2P0DP08 117 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 HMGA2P52926 109 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 KCNJ8Q15842 424 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 FAM201AQ5SY85 155 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 PRAMEF6Q5VXH4 476 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms