RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 PVALBP20472 110 aaPredicted RBP11.09□□□□□ -0.63
SCN3B-206ENST00000530277 ZNF121P58317 390 aaPredicted RBP11.09□□□□□ -0.63
SCN3B-206ENST00000530277 SYT13Q7L8C5 426 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 HSD17B11Q8NBQ5 300 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 OR4D6Q8NGJ1 314 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 AKR7LQ8NHP1 331 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 CA10Q9NS85 328 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 DIDO1Q9BTC0 2240 aaKnown RBP11.09□□□□□ -0.63
SCN3B-206ENST00000530277 FRG2CA6NGY1 282 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 PTP4A3O75365 173 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 MTRF1O75570 445 aaKnown RBP11.09□□□□□ -0.63
SCN3B-206ENST00000530277 MT-ATP6P00846 226 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 LPLP06858 475 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 HOXC12P31275 282 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 FOXK1P85037 733 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 ZNF169Q14929 603 aaPredicted RBP11.09□□□□□ -0.63
SCN3B-206ENST00000530277 LTC4SQ16873 150 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 EIF5AL1Q6IS14 154 aaKnown RBP11.09□□□□□ -0.63
SCN3B-206ENST00000530277 OR1M1Q8NGA1 313 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 PPP1R1CQ8WVI7 109 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 SECTM1Q8WVN6 248 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 RADILQ96JH8 1075 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 TMPRSS13Q9BYE2 586 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 PBOV1Q9GZY1 135 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 C12orf49Q9H741 205 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 GDF2Q9UK05 429 aaPredicted RBP11.09□□□□□ -0.63
SCN3B-206ENST00000530277 ETV7Q9Y603 341 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 RALGAPA1Q6GYQ0 2036 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 PATE3B3GLJ2 98 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 GDF9O60383 454 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 B4GALT1P15291 398 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 PPA1Q15181 289 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 STX12Q86Y82 276 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 SGPP2Q8IWX5 399 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 DUSP18Q8NEJ0 188 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 MRI1Q9BV20 369 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 MN1Q10571 1320 aaPredicted RBP11.09□□□□□ -0.63
SCN3B-206ENST00000530277 PIN1P1O15428 100 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 SYNGR4O95473 234 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 CBR1P16152 277 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 PPP3CBP16298 524 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 SERPINF1P36955 418 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 PPT1P50897 306 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 PLA2G7Q13093 441 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 CLINT1Q14677 625 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 SP6Q3SY56 376 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 OGFOD3Q6PK18 319 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 ATG4DQ86TL0 474 aaPredicted RBP11.09□□□□□ -0.63
SCN3B-206ENST00000530277 FNDC9Q8TBE3 224 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 ST6GALNAC2Q9UJ37 374 aa11.09□□□□□ -0.63
SCN3B-206ENST00000530277 SLC22A23A1A5C7 686 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 CXCL13O43927 109 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 CTAG2O75638 210 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 ZNF44P15621 663 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 DYRK1AQ13627 763 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 ZNF141Q15928 474 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 IAH1Q2TAA2 248 aaPredicted RBP11.08□□□□□ -0.64
SCN3B-206ENST00000530277 HACD4Q5VWC8 232 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 OPN5Q6U736 354 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 C9orf40Q8IXQ3 194 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 OR11H4Q8NGC9 324 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 KLHDC3Q9BQ90 382 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 ZFHX2Q9C0A1 2572 aaPredicted RBP11.08□□□□□ -0.64
SCN3B-206ENST00000530277 FER1L5A0AVI2 2057 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 HEATR5AQ86XA9 2040 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 PLXND1Q9Y4D7 1925 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 XRCC3O43542 346 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 SPRY1O43609 319 aaPredicted RBP11.08□□□□□ -0.64
SCN3B-206ENST00000530277 GLSO94925 669 aaPredicted RBP11.08□□□□□ -0.64
SCN3B-206ENST00000530277 CELA2AP08217 269 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 MEF2DQ14814 521 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 GALNT16Q8N428 558 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 OR5L1Q8NGL2 311 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 TM4SF19Q96DZ7 209 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 PGLYRP3Q96LB9 341 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 CCDC74BQ96LY2 380 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 C20orf24Q9BUV8 137 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 SLC19A3Q9BZV2 496 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 NLRC5Q86WI3 1866 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 TMEM272A0A1B0GTI8 110 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 TNFSF14O43557 240 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 UBCP0CG48 685 aaKnown RBP11.08□□□□□ -0.64
SCN3B-206ENST00000530277 PNLIPP16233 465 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 CAMLGP49069 296 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 PNLIPRP2P54317 469 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 FBXW12Q6X9E4 464 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 ZNF813Q6ZN06 617 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 ZFP82Q8N141 532 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 TMEM217Q8N7C4 229 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 OR10A2Q9H208 303 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 B3GNT2Q9NY97 397 aa11.08□□□□□ -0.64
SCN3B-206ENST00000530277 A0A1W2PP11 408 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 OR4C45A6NMZ5 311 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 SLC17A2O00624 439 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 TNFSF11O14788 317 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 MED6O75586 246 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 B3GALNT1O75752 331 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 PNPP00491 289 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 ASCL1P50553 236 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 SSR4P51571 173 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms