RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 MARS2Q96GW9 593 aaKnown RBP12.03□□□□□ -0.48
USF1-209ENST00000529476 CNBD2Q96M20 576 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 DOK1Q99704 481 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 CCL19Q99731 98 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 SYT3Q9BQG1 590 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 TRAF4Q9BUZ4 470 aaPredicted RBP12.03□□□□□ -0.48
USF1-209ENST00000529476 MROQ9BYG7 248 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 MRPL37Q9BZE1 423 aaKnown RBP12.03□□□□□ -0.48
USF1-209ENST00000529476 OR2J1Q9GZK6 312 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 BRD7Q9NPI1 651 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 FAIMQ9NVQ4 179 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 PTTG3PQ9NZH4 202 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 MRM2Q9UI43 246 aaKnown RBP12.03□□□□□ -0.48
USF1-209ENST00000529476 ST6GALNAC2Q9UJ37 374 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 PLEKHA6Q9Y2H5 1048 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 PCDHGB1Q9Y5G3 927 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 TMEM129A0AVI4 362 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 VSTM5A8MXK1 200 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 FAM20BO75063 409 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 ZNF254O75437 659 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 ATE1O95260 518 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 FADS2O95864 444 aaKnown RBP12.02□□□□□ -0.49
USF1-209ENST00000529476 CLPTM1O96005 669 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 IGHA1P01876 353 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 RAF1P04049 648 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 ANXA2P07355 339 aaKnown RBP12.02□□□□□ -0.49
USF1-209ENST00000529476 ADRA2AP08913 450 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 CD53P19397 219 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 MPV17P39210 176 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 ZNF121P58317 390 aaPredicted RBP12.02□□□□□ -0.49
USF1-209ENST00000529476 EGR3Q06889 387 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 EFNB3Q15768 340 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 SNAI3Q3KNW1 292 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 TMEM255AQ5JRV8 349 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 C6orf141Q5SZD1 244 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 AGAP6Q5VW22 663 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 DEGS2Q6QHC5 323 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 PLEKHG7Q6ZR37 379 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 PRSS45Q7RTY3 260 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 CDH24Q86UP0 819 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 DTX2Q86UW9 622 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 ACBD7Q8N6N7 88 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 BPIFB6Q8NFQ5 453 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 KLF14Q8TD94 323 aaPredicted RBP12.02□□□□□ -0.49
USF1-209ENST00000529476 IGFBPL1Q8WX77 278 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 GGHQ92820 318 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 PLK3Q9H4B4 646 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 FGF20Q9NP95 211 aaPredicted RBP12.02□□□□□ -0.49
USF1-209ENST00000529476 CBLN4Q9NTU7 201 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 MYEF2Q9P2K5 600 aaKnown RBP12.02□□□□□ -0.49
USF1-209ENST00000529476 DUSP13Q9UII6 198 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 PCDHGB5Q9Y5G0 923 aa12.02□□□□□ -0.49
USF1-209ENST00000529476 J3QW42 95 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 APOC1P02654 83 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 KRT8P05787 483 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 ZNF250P15622 560 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 RIDAP52758 137 aaKnown RBP12.01□□□□□ -0.49
USF1-209ENST00000529476 PSMA6P60900 246 aaKnown RBP12.01□□□□□ -0.49
USF1-209ENST00000529476 HLXQ14774 488 aaPredicted RBP12.01□□□□□ -0.49
USF1-209ENST00000529476 SWI5Q1ZZU3 235 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 ZNF718Q3SXZ3 478 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 TP53I3Q53FA7 332 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 ZNF684Q5T5D7 378 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 MBNL2Q5VZF2 373 aaKnown RBP12.01□□□□□ -0.49
USF1-209ENST00000529476 C11orf71Q6IPW1 123 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 FAM57BQ71RH2 274 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 LHFPL3Q86UP9 236 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 C1orf174Q8IYL3 243 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 YIPF7Q8N8F6 280 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 OR5L1Q8NGL2 311 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 SYNPRQ8TBG9 265 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 SNX33Q8WV41 574 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 COG8Q96MW5 612 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 NIPAL2Q9H841 368 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 PLCXD1Q9NUJ7 323 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 PSORS1C1Q9UIG5 152 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 NIPBLQ6KC79 2804 aaeCLIP12.01□□□□□ -0.49
USF1-209ENST00000529476 ARFGEF3Q5TH69 2177 aa12.01□□□□□ -0.49
USF1-209ENST00000529476 IGLV3-9A0A075B6K5 115 aa12□□□□□ -0.49
USF1-209ENST00000529476 A0A1W2PPW3 197 aa12□□□□□ -0.49
USF1-209ENST00000529476 IRGMA1A4Y4 181 aa12□□□□□ -0.49
USF1-209ENST00000529476 METTL15A6NJ78 407 aa12□□□□□ -0.49
USF1-209ENST00000529476 B9A039 149 aa12□□□□□ -0.49
USF1-209ENST00000529476 SLC1A7O00341 560 aa12□□□□□ -0.49
USF1-209ENST00000529476 TBX1O43435 398 aa12□□□□□ -0.49
USF1-209ENST00000529476 SRSF10O75494 262 aaKnown RBP12□□□□□ -0.49
USF1-209ENST00000529476 SULT1C4O75897 302 aa12□□□□□ -0.49
USF1-209ENST00000529476 RPP14O95059 124 aaKnown RBP12□□□□□ -0.49
USF1-209ENST00000529476 TUBG1P23258 451 aa12□□□□□ -0.49
USF1-209ENST00000529476 GCH1P30793 250 aa12□□□□□ -0.49
USF1-209ENST00000529476 PRSS12P56730 875 aa12□□□□□ -0.49
USF1-209ENST00000529476 KLF3P57682 345 aaPredicted RBP12□□□□□ -0.49
USF1-209ENST00000529476 MVKQ03426 396 aa12□□□□□ -0.49
USF1-209ENST00000529476 MFGE8Q08431 387 aaPredicted RBP12□□□□□ -0.49
USF1-209ENST00000529476 CDONQ4KMG0 1287 aa12□□□□□ -0.49
USF1-209ENST00000529476 GLYATL3Q5SZD4 288 aa12□□□□□ -0.49
USF1-209ENST00000529476 AHSA2Q719I0 299 aa12□□□□□ -0.49
USF1-209ENST00000529476 OR2AE1Q8NHA4 323 aa12□□□□□ -0.49
USF1-209ENST00000529476 CMBLQ96DG6 245 aa12□□□□□ -0.49
USF1-209ENST00000529476 PGAM5Q96HS1 289 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms