RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 GOLGA8QA0A0J9YX86 632 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 RNF103-CHMP3A0A140T963 221 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 GOLGA8OA6NCC3 632 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 E9PQ18 207 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 GOLGA8NF8WBI6 632 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 GOLGA8RI6L899 631 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 SLC28A1O00337 649 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 RAD51DO75771 328 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 GLCEO94923 617 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 UTS2O95399 124 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 ANGPTL1O95841 491 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 GUSBP08236 651 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 FGF4P08620 206 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 UROSP10746 265 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 PRPS2P11908 318 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 ELK4P28324 431 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 NTSP30990 170 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 KHKP50053 298 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 NCBP2P52298 156 aaKnown RBP eCLIP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 ABCE1P61221 599 aaKnown RBP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 ERVK-16P61578 105 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 DHODHQ02127 395 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 MFGE8Q08431 387 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 PDE7AQ13946 482 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 CAPRIN1Q14444 709 aaKnown RBP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 PON3Q15166 354 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 NNATQ16517 81 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 OR5M10Q6IEU7 315 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 NOXRED1Q6NXP6 359 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 STAC2Q6ZMT1 411 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 RPS27LQ71UM5 84 aaKnown RBP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 P4HA3Q7Z4N8 544 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 CARM1Q86X55 608 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 LYG1Q8N1E2 194 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 SLC43A2Q8N370 569 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 Q8N377 158 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 MNS1Q8NEH6 495 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 STEAP2Q8NFT2 490 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 PSMA8Q8TAA3 256 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 C8orf46Q8TAG6 207 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 FNDC9Q8TBE3 224 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 RDH11Q8TC12 318 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.78□□□□□ -1.81e-7■■■■□ 24.2
CSDE1-212ENST00000529046 EXOSC8Q96B26 276 aaKnown RBP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 EFHD2Q96C19 240 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 TRIM44Q96DX7 344 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 ZBED6CLQ96FA7 236 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 FAM111AQ96PZ2 611 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 STACQ99469 402 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 CCL19Q99731 98 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 CCT7Q99832 543 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 VGLL1Q99990 258 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 PYGO2Q9BRQ0 406 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 PINK1Q9BXM7 581 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 TBL1XR1Q9BZK7 514 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 SLC5A7Q9GZV3 580 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 GLIPR2Q9H4G4 154 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 VIPAS39Q9H9C1 493 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 ANKRA2Q9H9E1 313 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 MIEF1Q9NQG6 463 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 UBQLN4Q9NRR5 601 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 DDX18Q9NVP1 670 aaKnown RBP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 SENP1Q9P0U3 644 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 ACTR3BQ9P1U1 418 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 KLK11Q9UBX7 282 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 IL19Q9UHD0 177 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 MPDZO75970 2070 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 FLNAP21333 2647 aaKnown RBP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 KIAA1549Q9HCM3 1950 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 IQCMA0A1B0GVH7 501 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 EXOC1LA0A1B0GW35 172 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 GJE1A6NN92 205 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 KIF2AO00139 706 aaPredicted RBP3.77□□□□□ -1.81
CSDE1-212ENST00000529046 UBFD1O14562 309 aaKnown RBP3.77□□□□□ -1.81
CSDE1-212ENST00000529046 RIPK2O43353 540 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 NOL3O60936 208 aaKnown RBP3.77□□□□□ -1.81
CSDE1-212ENST00000529046 GCM2O75603 506 aaPredicted RBP3.77□□□□□ -1.81
CSDE1-212ENST00000529046 AQP8O94778 261 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 KCNK2O95069 426 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 LY6G6DO95868 133 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 NEFHP12036 1026 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 TSPAN8P19075 237 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 ME2P23368 584 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 FKBP2P26885 142 aaKnown RBP3.77□□□□□ -1.81
CSDE1-212ENST00000529046 GIFP27352 417 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 ASMTP46597 345 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 CRYBA2P53672 197 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 FOXA1P55317 472 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 CTBP2P56545 445 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 STX1BP61266 288 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 HTD2P86397 168 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 C2orf80Q0P641 193 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 NPRL3Q12980 569 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 PDK3Q15120 406 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 MAPK11Q15759 364 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 FAM189A2Q15884 450 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 SGCBQ16585 318 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 PLPPR5Q32ZL2 321 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 LRRC37A5PQ49AS3 106 aa3.77□□□□□ -1.81
CSDE1-212ENST00000529046 TCHHL1Q5QJ38 904 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms