RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 IDH3BO43837 385 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 CCNB2O95067 398 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 NGFP01138 241 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 IGHV3-13P01766 116 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 HPXP02790 462 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 LCKP06239 509 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 RAP2AP10114 183 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 GAAP10253 952 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 COX5BP10606 129 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 NAT2P11245 290 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 DAOP14920 347 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 CCNOP22674 350 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 GIFP27352 417 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 NR4A2P43354 598 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 GDI2P50395 445 aaKnown RBP7.19□□□□□ -1.26
SSBP3-212ENST00000528930 LSM6P62312 80 aaKnown RBP7.19□□□□□ -1.26
SSBP3-212ENST00000528930 HIST1H3AP68431 136 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 MICAQ29983 383 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 ELFN2Q5R3F8 820 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 ZNF362Q5T0B9 420 aaPredicted RBP7.19□□□□□ -1.26
SSBP3-212ENST00000528930 HIST2H3PS2Q5TEC6 136 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 OR2T5Q6IEZ7 315 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 LEG1Q6P5S2 330 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 RASSF6Q6ZTQ3 369 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 HIST2H3AQ71DI3 136 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 ZBTB46Q86UZ6 589 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 WFDC3Q8IUB2 231 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 GLB1L2Q8IW92 636 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 AQP12AQ8IXF9 295 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 OR6V1Q8N148 313 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 ZNF786Q8N393 782 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 OR8D4Q8NGM9 314 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 OR2T29Q8NH02 315 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 OR4K13Q8NH42 304 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 ZNF420Q8TAQ5 688 aaPredicted RBP7.19□□□□□ -1.26
SSBP3-212ENST00000528930 SYNPRQ8TBG9 265 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 CANT1Q8WVQ1 401 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 C11orf40Q8WZ69 217 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 POP5Q969H6 163 aaKnown RBP7.19□□□□□ -1.26
SSBP3-212ENST00000528930 DUS3LQ96G46 650 aaKnown RBP7.19□□□□□ -1.26
SSBP3-212ENST00000528930 MARS2Q96GW9 593 aaKnown RBP7.19□□□□□ -1.26
SSBP3-212ENST00000528930 JMJD8Q96S16 334 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 SOX7Q9BT81 388 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 CHID1Q9BWS9 393 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 KRTAP4-11Q9BYQ6 195 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 RERGLQ9H628 205 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 C8orf4Q9NR00 106 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 TAAR3PQ9P1P4 343 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 CEPT1Q9Y6K0 416 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 CDH10Q9Y6N8 788 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 U3KQV3 271 aa7.19□□□□□ -1.26
SSBP3-212ENST00000528930 PLXNB1O43157 2135 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 IGHV4-61A0A0C4DH41 118 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 C17orf100A8MU93 164 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 LYNX1G3V0Z9 82 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 EREGO14944 169 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 NCR1O76036 304 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 BAG2O95816 211 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 TFP02787 698 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 HNRNPCP07910 306 aaKnown RBP eCLIP7.18□□□□□ -1.26
SSBP3-212ENST00000528930 LYNX1P0DP58 116 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 COL8A2P25067 703 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 CRABP1P29762 137 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 GCH1P30793 250 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 MPV17P39210 176 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 KLF3P57682 345 aaPredicted RBP7.18□□□□□ -1.26
SSBP3-212ENST00000528930 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.18□□□□□ -1.26
SSBP3-212ENST00000528930 SCRN3Q0VDG4 424 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 SCGB2A2Q13296 93 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 AQP6Q13520 282 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 RIN1Q13671 783 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 MEP1BQ16820 701 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 BEAN1Q3B7T3 259 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 ZNF829Q3KNS6 432 aaPredicted RBP7.18□□□□□ -1.26
SSBP3-212ENST00000528930 ALKBH6Q3KRA9 238 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 CLEC12AQ5QGZ9 265 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 SLC35F1Q5T1Q4 408 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 MBNL2Q5VZF2 373 aaKnown RBP7.18□□□□□ -1.26
SSBP3-212ENST00000528930 C11orf87Q6NUJ2 197 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 RFPL4BQ6ZWI9 263 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 TMEM179BQ7Z7N9 219 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 SATL1Q86VE3 508 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 PQLC1Q8N2U9 271 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 AQP11Q8NBQ7 271 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 NPEPL1Q8NDH3 523 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 OR52E2Q8NGJ4 325 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 SLC25A40Q8TBP6 338 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 C17orf50Q8WW18 174 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 ZNRF4Q8WWF5 429 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 SLC7A6Q92536 515 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 C4orf45Q96LM5 186 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 WWC2-AS2Q96NR7 200 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 PIMREGQ9BSJ6 248 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 DGCR6LQ9BY27 220 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 YTHDF1Q9BYJ9 559 aaKnown RBP7.18□□□□□ -1.26
SSBP3-212ENST00000528930 OR2J1Q9GZK6 312 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 BPESC1Q9GZL8 116 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 RACGAP1Q9H0H5 632 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 REEP1Q9H902 201 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 RPRD1BQ9NQG5 326 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms