RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 KLBQ86Z14 1044 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 OR9Q2Q8NGE9 314 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 OR51L1Q8NGJ5 315 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 FANK1Q8TC84 345 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 PITX2Q99697 317 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 BTBD10Q9BSF8 475 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 IFT27Q9BW83 186 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 CDADC1Q9BWV3 514 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 IL1RAPQ9NPH3 570 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 TMEM100Q9NV29 134 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 VNN3Q9NY84 501 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 ATPIF1Q9UII2 106 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 POLR1DQ9Y2S0 133 aa9.64□□□□□ -0.87
SRPRA-203ENST00000528744 DNAJC9-AS1A6NH13 148 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 C22orf46C9J442 243 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 BHLHE40O14503 412 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 LCATP04180 440 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 HKR1P10072 659 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 PRTN3P24158 256 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 SLC6A6P31641 620 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 RGS6P49758 472 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 ELF3P78545 371 aaPredicted RBP9.63□□□□□ -0.87
SRPRA-203ENST00000528744 ZNF92Q03936 586 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.63□□□□□ -0.87
SRPRA-203ENST00000528744 TRAP1Q12931 704 aaKnown RBP9.63□□□□□ -0.87
SRPRA-203ENST00000528744 TSPAN31Q12999 210 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 KRT72Q14CN4 511 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 ZNF404Q494X3 552 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 ZNF770Q6IQ21 691 aaPredicted RBP9.63□□□□□ -0.87
SRPRA-203ENST00000528744 SLC27A4Q6P1M0 643 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 ZNF620Q6ZNG0 422 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 TEX29Q8N6K0 151 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 OR5L1Q8NGL2 311 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 OR4C15Q8NGM1 316 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 GNPDA2Q8TDQ7 276 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 RAB40AQ8WXH6 277 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 COG8Q96MW5 612 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 JMJD8Q96S16 334 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 HDHD2Q9H0R4 259 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 PPP1R3EQ9H7J1 279 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 MED4Q9NPJ6 270 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 DDX28Q9NUL7 540 aaKnown RBP9.63□□□□□ -0.87
SRPRA-203ENST00000528744 UFSP2Q9NUQ7 469 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 TANC2Q9HCD6 1990 aa9.63□□□□□ -0.87
SRPRA-203ENST00000528744 IGHV2-70DA0A0C4DH43 119 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 KIR2DS1A0A191URI9 304 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 J3QW42 95 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 SURF4O15260 269 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 SPRY1O43609 319 aaPredicted RBP9.62□□□□□ -0.87
SRPRA-203ENST00000528744 FAM20BO75063 409 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 RENP00797 406 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 FABP3P05413 133 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 CLUP10909 449 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 ATP6V1B2P21281 511 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 CA6P23280 308 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 GATA4P43694 442 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 SCGB2A2Q13296 93 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 SLC9A3R2Q15599 337 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 ZNF181Q2M3W8 571 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 ESCO2Q56NI9 601 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 HSP90B2PQ58FF3 399 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 CYP2R1Q6VVX0 501 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 PIGWQ7Z7B1 504 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 PGAM4Q8N0Y7 254 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 FITM2Q8N6M3 262 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 ZNF511Q8NB15 262 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 SLC37A3Q8NCC5 494 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 OR4Q3Q8NH05 313 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 OR2AE1Q8NHA4 323 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 UPRTQ96BW1 309 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 NSMCE2Q96MF7 247 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 ATF6BQ99941 703 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 ZNF747Q9BV97 191 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 SSBP3Q9BWW4 388 aaPredicted RBP9.62□□□□□ -0.87
SRPRA-203ENST00000528744 RASSF4Q9H2L5 321 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 NTN4Q9HB63 628 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 CTSZQ9UBR2 303 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 TMCC3Q9ULS5 477 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 LYVE1Q9Y5Y7 322 aa9.62□□□□□ -0.87
SRPRA-203ENST00000528744 TCRBV5S2A0A599 114 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 CD300LBA8K4G0 201 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 TMPRSS2O15393 492 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 KCNAB3O43448 404 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 PLATP00750 562 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 GYPBP06028 91 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 SLC2A1P11166 492 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 RPS2P15880 293 aaKnown RBP9.61□□□□□ -0.87
SRPRA-203ENST00000528744 NOS3P29474 1203 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 OTX1P32242 354 aaPredicted RBP9.61□□□□□ -0.87
SRPRA-203ENST00000528744 PSMB10P40306 273 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 CD200P41217 278 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 SRP9P49458 86 aaKnown RBP9.61□□□□□ -0.87
SRPRA-203ENST00000528744 SMIM11AP58511 58 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 MS4A2Q01362 244 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 POU4F2Q12837 409 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 BAMBIQ13145 260 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 ARMCX4Q5H9R4 360 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 GLYATL3Q5SZD4 288 aa9.61□□□□□ -0.87
SRPRA-203ENST00000528744 WDR25Q64LD2 544 aaPredicted RBP9.61□□□□□ -0.87
SRPRA-203ENST00000528744 SFRP4Q6FHJ7 346 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms