RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ACSM4P0C7M7 580 aa18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 IFNGR2P38484 337 aa18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 PMELP40967 661 aa18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 GK2Q14410 553 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 ZNF181Q2M3W8 571 aa18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 SLC18B1Q6NT16 456 aa18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 PGAP1Q75T13 922 aa18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 FUZQ9BT04 418 aa18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 GORASP2Q9H8Y8 452 aa18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 UFSP2Q9NUQ7 469 aa18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 CLN8Q9UBY8 286 aa18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 TMPRSS2O15393 492 aa18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 ZNF823P16415 610 aa18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 PITPNBP48739 271 aa18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 RAD23AP54725 363 aa18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 TPTEP56180 551 aa18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 ZNF404Q494X3 552 aa18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 SLC35F1Q5T1Q4 408 aa18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 COLCA1Q6ZS62 124 aa18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 SDR9C7Q8NEX9 313 aa18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 C1orf147Q96MC9 270 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 FN3KQ9H479 309 aa18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 SOX21Q9Y651 276 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC4-208ENST00000527680 KIR2DS1A0A191URI9 304 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 OR6C68A6NDL8 312 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 IDH3BO43837 385 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 RNASE1P07998 156 aaKnown RBP18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 PPIAL4GP0DN37 164 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 PAX2Q02962 417 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 TRAP1Q12931 704 aaKnown RBP18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 SLC9A3R2Q15599 337 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 TUSC1Q2TAM9 212 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 MRPL21Q7Z2W9 205 aaKnown RBP18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 ZBTB46Q86UZ6 589 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 C19orf18Q8NEA5 215 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 GNPDA2Q8TDQ7 276 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 UPRTQ96BW1 309 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 NUDT16L1Q9BRJ7 211 aaKnown RBP18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 FAM107BQ9H098 131 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 UNKLQ9H9P5 680 aaKnown RBP18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 CYB5R1Q9UHQ9 305 aa18.7■□□□□ 0.58
TRAPPC4-208ENST00000527680 TRAV40A0A0B4J280 105 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 WIPF1O43516 503 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 PRDX6P30041 224 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 MSX2P35548 267 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 GGT2P36268 569 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 MAB21L1Q13394 359 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 OR8G1Q15617 311 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 LYPD2Q6UXB3 125 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 CELF2-AS1Q8N7Q2 184 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 BOLLQ8N9W6 283 aaKnown RBP18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 SPTSSAQ969W0 71 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 ZDHHC16Q969W1 377 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 ERGIC1Q969X5 290 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 MYLK2Q9H1R3 596 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 MED4Q9NPJ6 270 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 MAGEL2Q9UJ55 1249 aa18.69■□□□□ 0.58
TRAPPC4-208ENST00000527680 FSTL3O95633 263 aa18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 FABP3P05413 133 aa18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 CA6P23280 308 aa18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 RRM2P31350 389 aa18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 GATA4P43694 442 aa18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 IL13RA1P78552 427 aa18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 KRTAP27-1Q3LI81 207 aa18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 CLEC12AQ5QGZ9 265 aa18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 PRAMEF6Q5VXH4 476 aa18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 DCDC5Q6ZRR9 648 aa18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 NSMCE2Q96MF7 247 aa18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 MMADHCQ9H3L0 296 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC4-208ENST00000527680 GGT3PA6NGU5 568 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 CLDN34H7C241 214 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 M0R135 149 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 FAM20BO75063 409 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 PYCR1P32322 319 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 MPPED2Q15777 294 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 WDR25Q64LD2 544 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 C9orf139Q6ZV77 190 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 PROKR2Q8NFJ6 384 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 OR10S1Q8NGN2 331 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 TAF15Q92804 592 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 ZNF799Q96GE5 643 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 TECTBQ96PL2 329 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 SLC22A4Q9H015 551 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 FN3KRPQ9HA64 309 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 NOP16Q9Y3C1 178 aaKnown RBP18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 N6AMT1Q9Y5N5 214 aa18.67■□□□□ 0.58
TRAPPC4-208ENST00000527680 A0A1B0GWJ7 208 aa18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 POM121CA8CG34 1229 aa18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 PHYHO14832 338 aa18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 PLATP00750 562 aa18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 CD200P41217 278 aa18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 GSSP48637 474 aa18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 FGF12P61328 243 aa18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 TSPAN31Q12999 210 aa18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 PRR31Q5SQ13 230 aa18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 SFRP4Q6FHJ7 346 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 C16orf87Q6PH81 154 aa18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 BRD3OSQ6XYD6 125 aa18.66■□□□□ 0.58
TRAPPC4-208ENST00000527680 SPATC1Q76KD6 591 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms