RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 DGCR6LQ9BY27 220 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 MUC13Q9H3R2 512 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 OCEL1Q9H607 264 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 PPP1R3CQ9UQK1 317 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 SAMHD1Q9Y3Z3 626 aaKnown RBP8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 A0A0G2JMP0 313 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 A0A0X1KG70 313 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 J3QLI3 93 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 CYB5R3P00387 301 aaPredicted RBP8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 LCATP04180 440 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF823P16415 610 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 EPHA1P21709 976 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 SLC6A9P48067 706 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 SLC25A1P53007 311 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 HOXA4Q00056 320 aaPredicted RBP8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 ECH1Q13011 328 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 MAB21L1Q13394 359 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 PCK2Q16822 640 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 TMEM155Q4W5P6 130 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 FAM201AQ5SY85 155 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 LINC01590Q5TEZ4 76 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 DCAF12L2Q5VW00 463 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 RPL13AP3Q6NVV1 102 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 SHQ1Q6PI26 577 aaKnown RBP8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 PEG10Q86TG7 708 aaKnown RBP8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 MOGAT3Q86VF5 341 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 IQCF1Q8N6M8 205 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 DEFB108BQ8NET1 73 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 PROKR2Q8NFJ6 384 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 OR4M2Q8NGB6 313 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 OR2T4Q8NH00 348 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 CCDC124Q96CT7 223 aaKnown RBP8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 ASB9Q96DX5 294 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 CHID1Q9BWS9 393 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 HCAR1Q9BXC0 346 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 C7orf69Q9H7B7 122 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 REEP1Q9H902 201 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 TMEM165Q9HC07 324 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 DDX28Q9NUL7 540 aaKnown RBP8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 TBC1D23Q9NUY8 699 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 TMEM100Q9NV29 134 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 FAM53CQ9NYF3 392 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 KCNG2Q9UJ96 466 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 PRPF19Q9UMS4 504 aaKnown RBP8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 POLR3KQ9Y2Y1 108 aaPredicted RBP8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 COMMD3-BMI1R4GMX3 469 aa8.76□□□□□ -1.01
PRPF40B-204ENST00000527253 TENM1Q9UKZ4 2725 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 NBEAL1Q6ZS30 2694 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 PPIAL4EA0A075B759 164 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 PPIAL4CA0A0B4J2A2 164 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 CEACAM18A8MTB9 384 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 PPIAL4DF5H284 164 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 M0R135 149 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 SURF4O15260 269 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 WNT2P09544 360 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 PPIAL4FP0DN26 164 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 RAP2AP10114 183 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 SPI1P17947 270 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 OTX1P32242 354 aaPredicted RBP8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 MDH2P40926 338 aaKnown RBP8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 SRP9P49458 86 aaKnown RBP8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 RAD23AP54725 363 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 TPTEP56180 551 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF92Q03936 586 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 FAM98BQ52LJ0 330 aaKnown RBP8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 GLYATL3Q5SZD4 288 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 SLC27A4Q6P1M0 643 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 CD300LDQ6UXZ3 194 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 DCXRQ7Z4W1 244 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 SPICQ8N5J4 248 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 OR10G2Q8NGC3 310 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 OR2AE1Q8NHA4 323 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 ST7LQ8TDW4 575 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 CANT1Q8WVQ1 401 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF799Q96GE5 643 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 FEVQ99581 238 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 THTPAQ9BU02 230 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 C1orf21Q9H246 121 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 MED20Q9H944 212 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 PCDHB10Q9UN67 800 aa8.75□□□□□ -1.01
PRPF40B-204ENST00000527253 A0A0A6YYJ9 748 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 FAM183AA6NL82 134 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 CD300LBA8K4G0 201 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 A8MXK9 166 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF593O00488 134 aaPredicted RBP8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 FOXH1O75593 365 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 SPARCP09486 303 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 SLC2A1P11166 492 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF12P17014 697 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 GATA3P23771 443 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 CD200P41217 278 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 GATA4P43694 442 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 ENTPD1P49961 510 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 PRKXP51817 358 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 HILS1P60008 231 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 PAX2Q02962 417 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF154Q13106 437 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 MPPED2Q15777 294 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 TUSC1Q2TAM9 212 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 KLF17Q5JT82 389 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms