RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 FGFR1OP2Q9NVK5 253 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 GID8Q9NWU2 228 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 ERVK-18Q9QC07 812 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 POLR1DQ9Y2S0 133 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 BBIP1A8MTZ0 92 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 IMPA2O14732 288 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 PTP4A3O75365 173 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 NDUFB2O95178 105 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 CD200P41217 278 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 KCNJ8Q15842 424 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 TAF9Q16594 264 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 CLEC12AQ5QGZ9 265 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 PGM2L1Q6PCE3 622 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 ADCK1Q86TW2 530 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 WDFY2Q96P53 400 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 TBX15Q96SF7 602 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 TRIM15Q9C019 465 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 ACOXLQ9NUZ1 547 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 TMCC3Q9ULS5 477 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 SIGLEC7Q9Y286 467 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 TMEM5Q9Y2B1 443 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 LHFPL6Q9Y693 200 aa13.36□□□□□ -0.27
PTPRU-210ENST00000527027 LOC100653049A0A140TA62 436 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 SOCS2O14508 198 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 FAM20BO75063 409 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 KRT34O76011 436 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 CLPXO76031 633 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 CENPAP49450 140 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 RAD23AP54725 363 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 KLF10Q13118 480 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 GK2Q14410 553 aaPredicted RBP13.35□□□□□ -0.27
PTPRU-210ENST00000527027 MPPED2Q15777 294 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 MEP1BQ16820 701 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 PRAMEF6Q5VXH4 476 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 CORO6Q6QEF8 472 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 PTCHD4Q6ZW05 846 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.35□□□□□ -0.27
PTPRU-210ENST00000527027 FAM46AQ96IP4 442 aaKnown RBP13.35□□□□□ -0.27
PTPRU-210ENST00000527027 GPX7Q96SL4 187 aaPredicted RBP13.35□□□□□ -0.27
PTPRU-210ENST00000527027 MMADHCQ9H3L0 296 aaPredicted RBP13.35□□□□□ -0.27
PTPRU-210ENST00000527027 UFSP2Q9NUQ7 469 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 RNF7Q9UBF6 113 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 CTSZQ9UBR2 303 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 RPS6KA6Q9UK32 745 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 IER3IP1Q9Y5U9 82 aa13.35□□□□□ -0.27
PTPRU-210ENST00000527027 SLC22A31A6NKX4 558 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 GPR137BO60478 399 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 ZNF682O95780 498 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 TXNDC12O95881 172 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 IGHV4-59P01825 116 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 CRABP1P29762 137 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 CDKN2AP42771 156 aaKnown RBP13.34□□□□□ -0.27
PTPRU-210ENST00000527027 PRSS12P56730 875 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 PROK1P58294 105 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 COX10Q12887 443 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 MAPRE2Q15555 327 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 KRTAP27-1Q3LI81 207 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 IFI44LQ53G44 452 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 METTL11BQ5VVY1 283 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 DNM1P34Q6PK57 102 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 PNLDC1Q8NA58 520 aaKnown RBP13.34□□□□□ -0.27
PTPRU-210ENST00000527027 SLC7A13Q8TCU3 470 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 TSSK2Q96PF2 358 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 TMEM120AQ9BXJ8 343 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 ANKRD19PQ9H560 264 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 FN3KRPQ9HA64 309 aa13.34□□□□□ -0.27
PTPRU-210ENST00000527027 IGHV1-69DA0A0B4J2H0 117 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 F5H5K5 113 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 LGALS8O00214 317 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 DCTN6O00399 190 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 NDUFA2O43678 99 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 IGHV1-69P01742 117 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 ACSM4P0C7M7 580 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 IER3P46695 156 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 RPS6KA3P51812 740 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 HOXA4Q00056 320 aaPredicted RBP13.33□□□□□ -0.28
PTPRU-210ENST00000527027 ECH1Q13011 328 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 MALLQ13021 153 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 SFRP4Q6FHJ7 346 aaPredicted RBP13.33□□□□□ -0.28
PTPRU-210ENST00000527027 DPY19L2P2Q6ZN68 376 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 FKBP9P1Q75LS8 142 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 CBLL1Q75N03 491 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 PGAP1Q75T13 922 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 SPRYD4Q8WW59 207 aaPredicted RBP13.33□□□□□ -0.28
PTPRU-210ENST00000527027 SLCO4A1Q96BD0 722 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 SLC22A4Q9H015 551 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 SIRPDQ9H106 197 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 TCF7L1Q9HCS4 588 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 CMTM6Q9NX76 183 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 B9D1Q9UPM9 204 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 AP3M1Q9Y2T2 418 aa13.33□□□□□ -0.28
PTPRU-210ENST00000527027 NOP16Q9Y3C1 178 aaKnown RBP13.33□□□□□ -0.28
PTPRU-210ENST00000527027 A0A0U1RQK1 487 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 C3orf80F5H4A9 247 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 ADAM20O43506 726 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 PPP1R3DO95685 299 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 FAM107AO95990 144 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 LCATP04180 440 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 CA6P23280 308 aa13.32□□□□□ -0.28
PTPRU-210ENST00000527027 FXYD6P3P58550 94 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms