RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 RAB25P57735 213 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 EIF3EP60228 445 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 UBE2NP61088 152 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 STXBP1P61764 594 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 NUTF2P61970 127 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 RPS14P62263 151 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 RAP1AP62834 184 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 MRPS25P82663 173 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 STX5Q13190 355 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 ART3Q13508 389 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 AQP6Q13520 282 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 SPA17Q15506 151 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 OR7A5Q15622 319 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 TSC22D1Q15714 1073 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 CHRNA6Q15825 494 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 TMEM183BQ1AE95 376 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 ALKBH6Q3KRA9 238 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 HIKESHIQ53FT3 197 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 CCDC122Q5T0U0 273 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 TPTE2P1Q5T6R2 138 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 HES5Q5TA89 166 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 ANKRD22Q5VYY1 191 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 SPECC1LQ69YQ0 1117 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 C22orf42Q6IC83 251 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 REEP3Q6NUK4 255 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 TMEM53Q6P2H8 277 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 SPESP1Q6UW49 350 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 C12orf54Q6X4T0 127 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 ZNF493Q6ZR52 646 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 RFLNAQ6ZTI6 216 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 SNX20Q7Z614 316 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 CMC1Q7Z7K0 106 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 SCD5Q86SK9 330 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 CALHM1Q8IU99 346 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 BBS7Q8IWZ6 715 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 TMEM183AQ8IXX5 376 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 PIANPQ8IYJ0 282 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 MICU2Q8IYU8 434 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 GABRG1Q8N1C3 465 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 GTPBP8Q8N3Z3 284 aaPredicted RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 SNX31Q8N9S9 440 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 SDR9C7Q8NEX9 313 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 OR2L3Q8NG85 312 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 OR4A15Q8NGL6 344 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 OR9A2Q8NGT5 310 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 OR8K3Q8NH51 312 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 LILRB4Q8NHJ6 448 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 ERMNQ8TAM6 284 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 ABHD3Q8WU67 409 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 APH1BQ8WW43 257 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 CAPSLQ8WWF8 208 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 KIFAP3Q92845 792 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 TMEM230Q96A57 120 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 APH1AQ96BI3 265 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 C8orf44Q96CB5 159 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 CCDC124Q96CT7 223 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 DYNLL2Q96FJ2 89 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 GALNT14Q96FL9 552 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 RNF170Q96K19 258 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 ARL5BQ96KC2 179 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 OR10C1Q96KK4 312 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 JSRP1Q96MG2 331 aaPredicted RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 RNF157Q96PX1 679 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 TRNT1Q96Q11 434 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 ZNF382Q96SR6 550 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 UTP23Q9BRU9 249 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 COPS4Q9BT78 406 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 MED10Q9BTT4 135 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 NUDT9Q9BW91 350 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 FAIM2Q9BWQ8 316 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 DNTTIP1Q9H147 329 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 VCX3BQ9H321 246 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 GAL3ST2Q9H3Q3 398 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 PIGUQ9H490 435 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 SAV1Q9H4B6 383 aaPredicted RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 RGCCQ9H4X1 137 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 RPF2Q9H7B2 306 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 AUNIPQ9H7T9 357 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 PSTPIP2Q9H939 334 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 ANKRA2Q9H9E1 313 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 CYP3A43Q9HB55 503 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 HMG20AQ9NP66 347 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 KCNJ16Q9NPI9 418 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 C20orf96Q9NUD7 363 aaPredicted RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 DDX19AQ9NUU7 478 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 AHSPQ9NZD4 102 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 MTCH1Q9NZJ7 389 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 CLN8Q9UBY8 286 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 PISDQ9UG56 409 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 CD300AQ9UGN4 299 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 LGALS13Q9UHV8 139 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 C14orf166Q9Y224 244 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 PRELID1Q9Y255 219 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 CSDC2Q9Y534 153 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 POLR3HQ9Y535 204 aaPredicted RBP0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 TMEM14AQ9Y6G1 99 aa0.88□□□□□ -2.27
ECHDC1-219ENST00000526299 MSH6P52701 1360 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 CNTNAP1P78357 1384 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 CARMIL3Q8ND23 1372 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 IGLV1-50A0A075B6I6 118 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms