RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 RIOK2Q9BVS4 552 aaKnown RBP2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 OSBPL11Q9BXB4 747 aa2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 C1QTNF4Q9BXJ3 329 aa2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 NXF2Q9GZY0 626 aaKnown RBP2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 DHX35Q9H5Z1 703 aaKnown RBP2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 SPANXB1Q9NS25 103 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 FGFR1OP2Q9NVK5 253 aa2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 IL17CQ9P0M4 197 aa2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 SHPKQ9UHJ6 478 aa2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 ZNF107Q9UII5 783 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 CES1P1Q9UKY3 287 aa2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 AP3M1Q9Y2T2 418 aa2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 MTCH2Q9Y6C9 303 aa2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 KCNE3Q9Y6H6 103 aa2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 MAPK8IP3Q9UPT6 1336 aa2.4□□□□□ -2.03
TRAPPC4-207ENST00000526141 IGLV4-3A0A075B6K6 122 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 IGHV3OR16-13A0A075B7E8 117 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 TRAV39A0A0B4J263 110 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 IGHV2OR16-5A0A0B4J2B6 119 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 A0A0G2JRQ6 117 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 A0A1W2PQL4 384 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 A0A1W2PRG6 482 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 RBMY1BA6NDE4 496 aaKnown RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 RBMY1EA6NEQ0 496 aaKnown RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 ZNF726A6NNF4 738 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 H0Y980 276 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 H3BQV1 296 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 J3QLI3 93 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 CDX4O14627 284 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 LINC01565O15544 149 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 SYNGR1O43759 233 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 SNAP91O60641 907 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 SRP72O76094 671 aaKnown RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 SEMA4FO95754 770 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 ASS1P00966 412 aaKnown RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 HPNP05981 417 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 CD48P09326 243 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 RBMY1DP0C7P1 496 aaKnown RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 LIMS3P0CW19 117 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 LIMS4P0CW20 117 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 RBMY1A1P0DJD3 496 aaKnown RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 IGLL1P15814 213 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 GABRG2P18507 467 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 IGHV1-2P23083 117 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 HTR1DP28221 377 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 RPA3P35244 121 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 SERPINB5P36952 375 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 CAPZBP47756 277 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 KLK7P49862 253 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 CAV2P51636 162 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 AQP5P55064 265 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 OR10A3P58181 314 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 OR12D2P58182 307 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 RAB8AP61006 207 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 CXCR4P61073 352 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 ERVS71-1P61550 626 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 SNRPD1P62314 119 aaKnown RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 CCL7P80098 99 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 RPL36AP83881 106 aaKnown RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 ACVR1Q04771 509 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 CD164Q04900 197 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 C2orf54Q08AI8 447 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 PDIA2Q13087 525 aaKnown RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 SLC10A1Q14973 349 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 TRAM1Q15629 374 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 SLC1A5Q15758 541 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 C2CD6Q53TS8 623 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 PAGE3Q5JUK9 113 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 OGFRL1Q5TC84 451 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 HBMQ6B0K9 141 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 FAM53AQ6NSI3 398 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 PWWP2BQ6NUJ5 590 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 MED27Q6P2C8 311 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 CNIH2Q6PI25 160 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 DNM1P34Q6PK57 102 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 NR2C2APQ86WQ0 139 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 CATSPER3Q86XQ3 398 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 SLC13A5Q86YT5 568 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 APLFQ8IW19 511 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 C10orf67Q8IYJ2 551 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 STPG2Q8N412 459 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 ARRDC1Q8N5I2 433 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 RFLNBQ8N5W9 214 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 OR8G5Q8NG78 346 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 OR5B17Q8NGF7 314 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 OR52E2Q8NGJ4 325 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 OR6Q1Q8NGQ2 317 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 OR51E1Q8TCB6 317 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 ZFAND1Q8TCF1 268 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 GMPPAQ96IJ6 420 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 C18orf12Q96KH6 178 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 PPP1R36Q96LQ0 422 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 ZNF488Q96MN9 340 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 NOL4LQ96MY1 436 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 RASL11BQ9BPW5 248 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 MRPS26Q9BYN8 205 aaKnown RBP2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 BARHL1Q9BZE3 327 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 C20orf85Q9H1P6 137 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 OR51B6Q9H340 312 aa2.39□□□□□ -2.03
TRAPPC4-207ENST00000526141 PRORYQ9H606 182 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms