RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-216	ENST00000525997	ERCC1	P07992	297 aa	Predicted RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	ACSM4	P0C7M7	580 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	PATE4	P0C8F1	98 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	LIMS3	P0CW19	117 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	LIMS4	P0CW20	117 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	IGFBP2	P18065	325 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	MAPK3	P27361	379 aa	Predicted RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	APEX1	P27695	318 aa	Known RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	GCH1	P30793	250 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	TTK	P33981	857 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	GLRX	P35754	106 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	LIPA	P38571	399 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	DDOST	P39656	456 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	RPS27	P42677	84 aa	Known RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	PRKX	P51817	358 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNF121	P58317	390 aa	Predicted RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNF85	Q03923	595 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	MZT1	Q08AG7	82 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	MLLT11	Q13015	90 aa	Predicted RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	DAZAP2	Q15038	168 aa	Predicted RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	TIGD6	Q17RP2	521 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNF718	Q3SXZ3	478 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	TP53I3	Q53FA7	332 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	NCMAP	Q5T1S8	102 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	TMEM244	Q5VVB8	128 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	LIPN	Q5VXI9	398 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	LAIR2	Q6ISS4	152 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	FDX2	Q6P4F2	183 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	SLC22A25	Q6T423	547 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	SPATC1	Q76KD6	591 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	MRPL21	Q7Z2W9	205 aa	Known RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	LHFPL3	Q86UP9	236 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	NANOGP1	Q8N7R0	232 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	CPEB3	Q8NE35	698 aa	Known RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	CSNK2A3	Q8NEV1	391 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	LINC01560	Q8TB33	94 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	ABHD4	Q8TB40	342 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	SPRYD4	Q8WW59	207 aa	Predicted RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	C10orf35	Q96D05	121 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	CPNE2	Q96FN4	548 aa	Predicted RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	PLPPR2	Q96GM1	343 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	TECTB	Q96PL2	329 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	C1QTNF5	Q9BXJ0	243 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	SLC22A4	Q9H015	551 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNF442	Q9H7R0	627 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	PLEKHA1	Q9HB21	404 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	NOX3	Q9HBY0	568 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	ABCB9	Q9NP78	766 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	PNRC2	Q9NPJ4	139 aa	Known RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	CYSLTR2	Q9NS75	346 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	ERVK-18	Q9QC07	812 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	AASS	Q9UDR5	926 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	NUFIP1	Q9UHK0	495 aa	Known RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	MRM2	Q9UI43	246 aa	Known RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	OR52A1	Q9UKL2	312 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	COPS3	Q9UNS2	423 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	ATP23	Q9Y6H3	246 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	HIVEP3	Q5T1R4	2406 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	TRBV2	A0A0J9YWF9	115 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	LOC390937	A0A1W2PQ73	354 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	GGT3P	A6NGU5	568 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	ABCD4	O14678	606 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	SMPD2	O60906	423 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	NOL3	O60936	208 aa	Known RBP	4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	RPP14	O95059	124 aa	Known RBP	4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	LCK	P06239	509 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	THBD	P07204	575 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	HSMCR30	P0CW71	290 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNF35	P13682	527 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	RAC2	P15153	192 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	ACHE	P22303	614 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	GAL	P22466	123 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	PSMB9	P28065	219 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	C21orf33	P30042	268 aa	Predicted RBP	4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	SSTR2	P30874	369 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	EVX1	P49640	407 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	ETV1	P50549	477 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	UCP2	P55851	309 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	OR12D2	P58182	307 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	PPP1CB	P62140	327 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	BSPH1	Q075Z2	132 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	SNTB2	Q13425	540 aa	Known RBP	4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	ALKBH1	Q13686	389 aa	Known RBP	4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	IRF3	Q14653	427 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	CDK5R1	Q15078	307 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	KRTAP27-1	Q3LI81	207 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	YIF1B	Q5BJH7	314 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	C4orf48	Q5BLP8	95 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	FAM209A	Q5JX71	171 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNF684	Q5T5D7	378 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	ZBTB37	Q5TC79	503 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	UBE2U	Q5VVX9	321 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	ADAM5	Q6NVV9	412 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	PAMR1	Q6UXH9	720 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	COLCA1	Q6ZS62	124 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	FAM57B	Q71RH2	274 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	PGAP1	Q75T13	922 aa		4.54	□□□□□ -1.68
PUM1-216	ENST00000525997	DOK3	Q7L591	496 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms