RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 DOK3Q7L591 496 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 BCL6BQ8N143 479 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 ZNF555Q8NEP9 628 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 DEFB108BQ8NET1 73 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 OR52E2Q8NGJ4 325 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 OR8D4Q8NGM9 314 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 OR4K13Q8NH42 304 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 SLC25A40Q8TBP6 338 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 MARS2Q96GW9 593 aaKnown RBP8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 WACQ9BTA9 647 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 KCNN2Q9H2S1 579 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 CCNB1IP1Q9NPC3 277 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 MMP26Q9NRE1 261 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 NOTCH1P46531 2555 aa8.09□□□□□ -1.12
TRAPPC4-206ENST00000525303 PRKDCP78527 4128 aaKnown RBP8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 PPIAL4EA0A075B759 164 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 PPIAL4CA0A0B4J2A2 164 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 C5orf49A4QMS7 147 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 ZAR1LA6NP61 321 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 PPIAL4DF5H284 164 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 H0YJX3 145 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 KHDRBS3O75525 346 aaKnown RBP8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 FOXH1O75593 365 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 SLC2A10O95528 541 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 PPIAL4FP0DN26 164 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 ZNF32P17041 273 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 CDAP32320 146 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 RBMXP38159 391 aaKnown RBP8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 MRPS34P82930 218 aaKnown RBP8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 SNAPC1Q16533 368 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 TUSC1Q2TAM9 212 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 SLC35F1Q5T1Q4 408 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 SLX4IPQ5VYV7 408 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 SLC25A47Q6Q0C1 308 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 TREML4Q6UXN2 200 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 PTCHD4Q6ZW05 846 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 OR2T4Q8NH00 348 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 OR4Q3Q8NH05 313 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 KLF14Q8TD94 323 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 POM121L2Q96KW2 1035 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 C1orf147Q96MC9 270 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 ZNF48Q96MX3 618 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 NMNAT3Q96T66 252 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 OR2J1Q9GZK6 312 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 EGLN1Q9GZT9 426 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 SYT4Q9H2B2 425 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 RASSF4Q9H2L5 321 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 FN3KQ9H479 309 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 RIBC2Q9H4K1 309 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 UNKLQ9H9P5 680 aaKnown RBP8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 SIAEQ9HAT2 523 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 CYSLTR2Q9NS75 346 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 DCAF16Q9NXF7 216 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 SMPD3Q9NY59 655 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 EIF3KQ9UBQ5 218 aaKnown RBP8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 ZNF69Q9UC07 566 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 PURGQ9UJV8 347 aaKnown RBP8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 NUP50Q9UKX7 468 aa8.08□□□□□ -1.12
TRAPPC4-206ENST00000525303 LOC100509620A0A075B734 347 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 PRR23D1E9PI22 279 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 TRAPPC2LH3BP13 241 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 SURF4O15260 269 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 PRODHO43272 600 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 MPZL2O60487 215 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 SLC16A7O60669 478 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 MITFO75030 526 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 ATP6V1G2O95670 118 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 IGHV2-70P01814 119 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 ADH4P08319 380 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 SBK2P0C263 348 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 PRR23D2P0DMB1 279 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 PEX2P28328 305 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 LAP3P28838 519 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 CDKN2AP42771 156 aaKnown RBP8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 GDI2P50395 445 aaKnown RBP8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 SLC25A1P53007 311 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 PCBD1P61457 104 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 SEC61A1P61619 476 aaKnown RBP8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 FMODQ06828 376 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 ZNF154Q13106 437 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 BAMBIQ13145 260 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 SGCAQ16586 387 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 LRRC36Q1X8D7 754 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 KLF17Q5JT82 389 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 MBNL2Q5VZF2 373 aaKnown RBP8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 TTC23Q5W5X9 447 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 UNQ6126/PRO20091Q6UXV3 157 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 RFPL4BQ6ZWI9 263 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 ZBTB46Q86UZ6 589 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 GLB1L2Q8IW92 636 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 IQCF1Q8N6M8 205 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 SLC37A3Q8NCC5 494 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 NPEPL1Q8NDH3 523 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 SDR9C7Q8NEX9 313 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 AKR7LQ8NHP1 331 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 ABHD4Q8TB40 342 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 TRUB1Q8WWH5 349 aaKnown RBP8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 TAF15Q92804 592 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 NABP1Q96AH0 204 aa8.07□□□□□ -1.12
TRAPPC4-206ENST00000525303 NMD3Q96D46 503 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms