RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ZNF582Q96NG8 517 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC9-215ENST00000524162 MSL2Q9HCI7 577 aa17.73■□□□□ 0.43
TRAPPC9-215ENST00000524162 YAE1D1Q9NRH1 226 aa17.73■□□□□ 0.43
TRAPPC9-215ENST00000524162 CLDN25C9JDP6 229 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 IFNL4K9M1U5 179 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 TPD52L2O43399 206 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 LCATP04180 440 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 PSKH1P11801 424 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 SLC2A5P22732 501 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 RPS27P42677 84 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 PTGES3Q15185 160 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 TSTQ16762 297 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 FAM166AQ6J272 317 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 ZFP1Q6P2D0 407 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 PLBD1Q6P4A8 553 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 Q6ZR03 302 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 RNF133Q8WVZ7 376 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 SLC30A2Q9BRI3 323 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 SP140LQ9H930 580 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 KRT84Q9NSB2 600 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 PTTG3PQ9NZH4 202 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 LPAR3Q9UBY5 353 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 CDC42EP3Q9UKI2 254 aa17.72■□□□□ 0.43
TRAPPC9-215ENST00000524162 PPIHO43447 177 aaKnown RBP17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 TNFAIP6P98066 277 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 EFNB1P98172 346 aa17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 GK2Q14410 553 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 HLXQ14774 488 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 DPY19L4Q7Z388 723 aa17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 CPOQ8IVL8 374 aa17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 OTOSQ8NHW6 89 aa17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 LRTOMTQ8WZ04 291 aa17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 TIMD4Q96H15 378 aa17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 COPS4Q9BT78 406 aa17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 SLC22A4Q9H015 551 aa17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 MED20Q9H944 212 aa17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 NOP16Q9Y3C1 178 aaKnown RBP17.71■□□□□ 0.43
TRAPPC9-215ENST00000524162 LRP5LA4QPB2 252 aa17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 LMX1BO60663 402 aa17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 CDH15P55291 814 aa17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 TRIP10Q15642 601 aa17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 SNAPC1Q16533 368 aa17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 ERI1Q8IV48 349 aaKnown RBP17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 LINC01356Q8N9X3 169 aa17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 OR6N2Q8NGY6 317 aa17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 CLDND2Q8NHS1 167 aa17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 RAB1CQ92928 201 aa17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 ABHD6Q9BV23 337 aa17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 REPIN1Q9BWE0 567 aaKnown RBP17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 OR51V1Q9H2C8 321 aa17.7■□□□□ 0.42
TRAPPC9-215ENST00000524162 DOCK11Q5JSL3 2073 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 LOC100289279A0A1B0GTE1 492 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 ZAR1LA6NP61 321 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 B4DSR2 109 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 CDC14BO60729 498 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 FSTL3O95633 263 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 EIF2B1Q14232 305 aaKnown RBP17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 TAF13Q15543 124 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 SLX4IPQ5VYV7 408 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 TMEM236Q5W0B7 351 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 OR2T2Q6IF00 324 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 PGAP1Q75T13 922 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 CXXC5Q7LFL8 322 aaKnown RBP17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 NAA40Q86UY6 237 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 ZNF283Q8N7M2 679 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 CELF2-AS1Q8N7Q2 184 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 OR2Z1Q8NG97 314 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 ITFG2Q969R8 447 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 SPSB4Q96A44 273 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 OTULINQ96BN8 352 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 NIPAL2Q9H841 368 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 KCNS2Q9ULS6 477 aa17.69■□□□□ 0.42
TRAPPC9-215ENST00000524162 XRCC2O43543 280 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 ZNF16P17020 682 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 PCMT1P22061 227 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 OPRL1P41146 370 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 SLC6A9P48067 706 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 LMO4P61968 165 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 ZNF181Q2M3W8 571 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 AMIGO2Q86SJ2 522 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 PEG10Q86TG7 708 aaKnown RBP17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 OR52H1Q8NGJ2 320 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 YIPF3Q9GZM5 350 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 CENPMQ9NSP4 180 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 TMEM100Q9NV29 134 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 TVP23BQ9NYZ1 205 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 TMEFF2Q9UIK5 374 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 WIPI2Q9Y4P8 454 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 SVEP1Q4LDE5 3571 aa17.68■□□□□ 0.42
TRAPPC9-215ENST00000524162 LYNP07948 512 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 ANPEPP15144 967 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 CPT2P23786 658 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 IL2RGP31785 369 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 DDOSTP39656 456 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 GATA4P43694 442 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 SRP9P49458 86 aaKnown RBP17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 DVL1P1P54792 670 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 SNAI3Q3KNW1 292 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 CHRFAM7AQ494W8 412 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 LCN1P1Q5VSP4 162 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms