RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PTBP1P26599 531 aaKnown RBP eCLIP11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 FGF9P31371 208 aaPredicted RBP11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 MZT1Q08AG7 82 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 FUT5Q11128 374 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 OR5M9Q8NGP3 310 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 CD300LFQ8TDQ1 290 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 PTP4A1Q93096 173 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 SRRQ9GZT4 340 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 NYNRINQ9P2P1 1898 aaKnown RBP11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 OR2M5A3KFT3 312 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 BHLHE40O14503 412 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 CRYZL1O95825 349 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 SKP2Q13309 424 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 BCL2A1Q16548 175 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 OR52H1Q8NGJ2 320 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 SLC7A6Q92536 515 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 CPNE4Q96A23 557 aaPredicted RBP11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 FOXB1Q99853 325 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 PLPP3O14495 311 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZNF780AO75290 641 aaPredicted RBP11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 FAM157BP0CG42 384 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 TAF9Q16594 264 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 GLYATL2Q8WU03 294 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 SCARF2Q96GP6 870 aaPredicted RBP11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 C4orf45Q96LM5 186 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 UFSP2Q9NUQ7 469 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZSWIM8A7E2V4 1837 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 VWA8A3KMH1 1905 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 HSPB2A8KAH6 182 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 IL2RAP01589 272 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 CSF2RBP32927 897 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 HSPB2Q16082 182 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 ELFN2Q5R3F8 820 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 FBXW12Q6X9E4 464 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 MDGA2Q7Z553 956 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 COMTD1Q86VU5 262 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 DND1Q8IYX4 353 aaKnown RBP11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 OR51F2Q8NH61 342 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 TMEM74BQ9NUR3 256 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 GPR160Q9UJ42 338 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 DOCK8Q8NF50 2099 aa11.73□□□□□ -0.53
PCDHGB1-201ENST00000523390 TRGV5A0A0B4J1U4 118 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 MKRN2OSH3BPM6 223 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 LPLP06858 475 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 SPINK14Q6IE38 97 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 ANKRD16Q6P6B7 361 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 AIFM2Q9BRQ8 373 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 EXOGQ9Y2C4 368 aaKnown RBP11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 SIP14410 1827 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 SPAARA0A1B0GVQ0 90 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 A0A1W2PR77 199 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 EFSO43281 561 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 BPNT1O95861 308 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 GLI4P10075 376 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 PTGS2P35354 604 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZMYND11Q15326 602 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 FAM221AA4D161 298 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 CD300LBA8K4G0 201 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZNF705EA8MWA4 302 aaPredicted RBP11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 PLPP2O43688 288 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 ACTL6BO94805 426 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 NRASP01111 189 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 PTHLHP12272 177 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 GALNSP34059 522 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 ACAA2P42765 397 aaKnown RBP11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 LAIR1Q6GTX8 287 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 FJX1Q86VR8 437 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 REEP6Q96HR9 211 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 BCO1Q9HAY6 547 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZFP57Q9NU63 452 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 GNG12Q9UBI6 72 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 OR6C65A6NJZ3 312 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 OGFOD3Q6PK18 319 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 CCDC190Q86UF4 302 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 ADGRG3Q86Y34 549 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 GCNT2Q8N0V5 402 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZNF721Q8TF20 911 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 MAFIPQ8WZ33 124 aa11.72□□□□□ -0.53
PCDHGB1-201ENST00000523390 TRAV1-2A0A0B4J238 106 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 PRRG2O14669 202 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 CCL3P10147 92 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 OPRM1P35372 400 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 CAMLGP49069 296 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZNF766Q5HY98 468 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 GLCCI1Q86VQ1 547 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 WDR5BQ86VZ2 330 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 OR10D3Q8NH80 312 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 DNASE2BQ8WZ79 361 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 EMG1Q92979 244 aaKnown RBP11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 INTS12Q96CB8 462 aaKnown RBP11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 SLA2Q9H6Q3 261 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 SLCO1B1Q9Y6L6 691 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 ALOX5APP20292 161 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 RAC1P63000 192 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 CDC20Q12834 499 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZNF687Q8N1G0 1237 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 LILRB2Q8N423 598 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 GALNT16Q8N428 558 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 SLC25A21Q9BQT8 299 aaPredicted RBP11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 OCSTAMPQ9BR26 566 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 381.4 ms