RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-218	ENST00000522222	ELOA3D	A6NLF2	546 aa	Predicted RBP	5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	ZNF724	A8MTY0	619 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222		A8MVM7	634 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	C16orf97	H3BN30	126 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222		J3QLW9	94 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	SIAH2	O43255	324 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	NOS1AP	O75052	506 aa	Predicted RBP	5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	NPIPB7	O75200	414 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	PEX14	O75381	377 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	NCR1	O76036	304 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	AHSA1	O95433	338 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	SLC2A10	O95528	541 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	IFNA7	P01567	189 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	HRG	P04196	525 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	EIF4E	P06730	217 aa	Known RBP	5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	CALCB	P10092	127 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	EPX	P11678	715 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	ZNF19	P17023	458 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	PTN	P21246	168 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	FKBP2	P26885	142 aa	Known RBP	5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	FAU	P35544	74 aa	Known RBP	5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	OR3A2	P47893	321 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	GDI2	P50395	445 aa	Known RBP	5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	MAP2K6	P52564	334 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	CAV3	P56539	151 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	FXYD6P3	P58550	94 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	ARPC4	P59998	168 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	SLC35A1	P78382	337 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	ZNF85	Q03923	595 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	CRMP1	Q14194	572 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	DAZAP2	Q15038	168 aa	Predicted RBP	5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	POU4F3	Q15319	338 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	OR7A5	Q15622	319 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	ELOA3B	Q3SY89	546 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	C6orf183	Q5T699	404 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	C1orf140	Q5VVS0	124 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	LINC00114	Q6XXX2	140 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	STAC2	Q6ZMT1	411 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	WDR88	Q6ZMY6	472 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	BTN2A1	Q7KYR7	527 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	CXorf67	Q86X51	503 aa	Predicted RBP	5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	SLC35F2	Q8IXU6	374 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	GABRG1	Q8N1C3	465 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	ELOA3	Q8NG57	546 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	OR4M2	Q8NGB6	313 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	OR13C2	Q8NGS9	318 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	PFN4	Q8NHR9	129 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	ZNF671	Q8TAW3	534 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	SMIM4	Q8WVI0	70 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	LIPH	Q8WWY8	451 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	NRGN	Q92686	78 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	GHSR	Q92847	366 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	PHF21A	Q96BD5	680 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	MED30	Q96HR3	178 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	WFIKKN1	Q96NZ8	548 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	DCLRE1C	Q96SD1	692 aa	Known RBP	5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	PTDSS2	Q9BVG9	487 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	POTEKP	Q9BYX7	375 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	OR51V1	Q9H2C8	321 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	CLEC4M	Q9H2X3	399 aa	Predicted RBP	5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	ISG20L2	Q9H9L3	353 aa	Known RBP	5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	PLSCR4	Q9NRQ2	329 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	MALT1	Q9UDY8	824 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	PRSS50	Q9UI38	385 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	ST6GALNAC2	Q9UJ37	374 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	SCP2D1	Q9UJQ7	156 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	TMEM14A	Q9Y6G1	99 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	MYO9A	B2RTY4	2548 aa		5.99	□□□□□ -1.45
SPIDR-218	ENST00000522222	CSMD1	Q96PZ7	3565 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	ANKRD17	O75179	2603 aa	Known RBP	5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	LRBA	P50851	2863 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	CSMD2	Q7Z408	3487 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222		A0A087WUJ7	227 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222		A0A0G2JK05	382 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	TRBV2	A0A0J9YWF9	115 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	TEX13C	A0A0J9YWL9	993 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222		A0A1W2PPR1	153 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	SHISA3	A0PJX4	238 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	FAM221A	A4D161	298 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	AQP7P3	A6NL99	342 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222		A8MV72	311 aa	Predicted RBP	5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	DEFB108A	A8MXU0	73 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	GABARAP	H6UMI1	98 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	AIP	O00170	330 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	EIF1B	O60739	113 aa	Known RBP	5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	GLCE	O94923	617 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	AKR7A3	O95154	331 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	GOSR1	O95249	250 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	PPP1R3D	O95685	299 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	IGHV3-9	P01782	118 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	RAF1	P04049	648 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	TCRB	P04435	133 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	THBD	P07204	575 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	H2AFB2	P0C5Z0	115 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	PSMB1	P20618	241 aa	Known RBP	5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	M6PR	P20645	277 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	COX5A	P20674	150 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	PYCR1	P32322	319 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	HTR2B	P41595	481 aa		5.98	□□□□□ -1.45
SPIDR-218	ENST00000522222	P2RY4	P51582	365 aa		5.98	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms