RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 GPR173Q9NS66 373 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 ANKRD10Q9NXR5 420 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 GNG12Q9UBI6 72 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF705GA8MUZ8 300 aaPredicted RBP12.49□□□□□ -0.41
SYNPO-205ENST00000522122 TSTD3H0UI37 97 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 GREM1O60565 184 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 SCGB2A1O75556 95 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 JTBO76095 146 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 CLDN1O95832 211 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 CISD3P0C7P0 127 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 SNRPNP63162 240 aaKnown RBP12.49□□□□□ -0.41
SYNPO-205ENST00000522122 PLA1AQ53H76 456 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 CST9LP1Q5W188 147 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 DPPA2Q7Z7J5 298 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 FOXJ3Q9UPW0 622 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 DICER1Q9UPY3 1922 aaKnown RBP12.49□□□□□ -0.41
SYNPO-205ENST00000522122 NUDT19A8MXV4 375 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 IMPA2O14732 288 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 GLI4P10075 376 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 ARL3P36405 182 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 BAMBIQ13145 260 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 PRSS42Q7Z5A4 293 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 ZBTB44Q8NCP5 570 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 HLA-CQ95604 372 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 SERTAD4Q9NUC0 356 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 PURGQ9UJV8 347 aaKnown RBP12.49□□□□□ -0.41
SYNPO-205ENST00000522122 KPTNQ9Y664 436 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 KIR2DS1A0A191URI9 304 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 ARPC3O15145 178 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 KIR2DS4P43632 304 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 GABRA2P47869 451 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 CYB561P49447 251 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 KIR2DS1Q14954 304 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 CPEB2Q7Z5Q1 589 aaKnown RBP12.48□□□□□ -0.41
SYNPO-205ENST00000522122 UBE3DQ7Z6J8 389 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 ATOH1Q92858 354 aaPredicted RBP12.48□□□□□ -0.41
SYNPO-205ENST00000522122 FGF14Q92915 247 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 WDR89Q96FK6 387 aaPredicted RBP12.48□□□□□ -0.41
SYNPO-205ENST00000522122 COX14Q96I36 57 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 M0R135 149 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 F10P00742 488 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 FOLR1P15328 257 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 KITLGP21583 273 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 NKX2-1P43699 371 aaPredicted RBP12.48□□□□□ -0.41
SYNPO-205ENST00000522122 PRSS53Q2L4Q9 553 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 KCNIP4Q6PIL6 250 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 SLC38A9Q8NBW4 561 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 LFNGQ8NES3 379 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 OR4C3Q8NH37 302 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 EMG1Q92979 244 aaKnown RBP12.48□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF799Q96GE5 643 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 GPA33Q99795 319 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF2Q9BSG1 426 aaPredicted RBP12.48□□□□□ -0.41
SYNPO-205ENST00000522122 DFFBO76075 338 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 NXPH2O95156 264 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 TCN2P20062 427 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 HRH1P35367 487 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 PDZK1IP1Q13113 114 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 BAP18Q8IXM2 172 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 MSI2Q96DH6 328 aaKnown RBP12.48□□□□□ -0.41
SYNPO-205ENST00000522122 PCM1Q15154 2024 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 MGMTP16455 207 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 PI3P19957 117 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 BCKDHBP21953 392 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 TSEN54Q7Z6J9 526 aaKnown RBP12.48□□□□□ -0.41
SYNPO-205ENST00000522122 OR11H7Q8NGC8 314 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 OR52B4Q8NGK2 314 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 OR10Z1Q8NGY1 313 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 OR8B4Q96RC9 309 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 ABHD1Q96SE0 405 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 PBOV1Q9GZY1 135 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 SERGEFQ9UGK8 458 aa12.48□□□□□ -0.41
SYNPO-205ENST00000522122 PYCARD-AS1I3L0S3 204 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 CDC42EP2O14613 210 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 SHOXO15266 292 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 YKT6O15498 198 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 ACSM4P0C7M7 580 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 LTC4SQ16873 150 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 DMKNQ6E0U4 476 aaPredicted RBP12.47□□□□□ -0.41
SYNPO-205ENST00000522122 PLXDC2Q6UX71 529 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 MAMSTRQ6ZN01 415 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 TMEM91Q6ZNR0 172 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 LANCL3Q6ZV70 420 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 TP53I13Q8NBR0 393 aaPredicted RBP12.47□□□□□ -0.41
SYNPO-205ENST00000522122 C17orf47Q8NEP4 570 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 DMBX1Q8NFW5 382 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 OR1J2Q8NGS2 313 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 MARCH1Q8TCQ1 289 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 CCDC74AQ96AQ1 378 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 PARP12Q9H0J9 701 aaKnown RBP12.47□□□□□ -0.41
SYNPO-205ENST00000522122 MGAMO43451 1857 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 NRG2O14511 850 aaPredicted RBP12.47□□□□□ -0.41
SYNPO-205ENST00000522122 CTSVO60911 334 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 GNB3P16520 340 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 LINC00696Q6ZRV3 163 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 EXD3Q8N9H8 876 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 OTOSQ8NHW6 89 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF646O15015 1829 aaPredicted RBP12.47□□□□□ -0.41
SYNPO-205ENST00000522122 SPTY2D1-AS1A0A0U1RR47 76 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 BHLHE40O14503 412 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms