RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 GDF15Q99988 308 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 RTL8AQ9BWD3 113 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 GPR55Q9Y2T6 319 aaPredicted RBP14.66□□□□□ -0.06
USP42-207ENST00000521713 MED16Q9Y2X0 877 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 ZNF728P0DKX0 622 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.65□□□□□ -0.06
USP42-207ENST00000521713 OPA3Q9H6K4 179 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 ASH2LQ9UBL3 628 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 NTNG1Q9Y2I2 539 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 ETV5P41161 510 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 MRPL19P49406 292 aaKnown RBP14.65□□□□□ -0.06
USP42-207ENST00000521713 RAG2P55895 527 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 UBE2IP63279 158 aaKnown RBP14.65□□□□□ -0.06
USP42-207ENST00000521713 PRAMEF9Q5VWM5 478 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 WDR74Q6RFH5 385 aaPredicted RBP14.65□□□□□ -0.06
USP42-207ENST00000521713 S100A7AQ86SG5 101 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 OR5D18Q8NGL1 313 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 OR2I1PQ8NGU4 316 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 UBE2FQ969M7 185 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 WDFY2Q96P53 400 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 S1PR5Q9H228 398 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 PIGLQ9Y2B2 252 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 RGS13O14921 159 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 AKR7A2O43488 359 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 CBR1P16152 277 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 HIST1H1CP16403 213 aaKnown RBP14.65□□□□□ -0.06
USP42-207ENST00000521713 FOXF1Q12946 379 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 LIPNQ5VXI9 398 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 ZNF793Q6ZN11 406 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 ADGRG3Q86Y34 549 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 LSMEM1Q8N8F7 131 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 DAZAP1Q96EP5 407 aaKnown RBP14.65□□□□□ -0.06
USP42-207ENST00000521713 SMOC1Q9H4F8 434 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 TRGV5A0A0B4J1U4 118 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 UMAD1C9J7I0 102 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 FXYD1O00168 92 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 AQP8O94778 261 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 PRR35P0CG20 571 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 F2RL1P55085 397 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 GFRALQ6UXV0 394 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 BAP18Q8IXM2 172 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 OR52I2Q8NH67 350 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 GNPNAT1Q96EK6 184 aaPredicted RBP14.65□□□□□ -0.06
USP42-207ENST00000521713 SLIRPQ9GZT3 109 aaKnown RBP14.65□□□□□ -0.06
USP42-207ENST00000521713 ZNF768Q9H5H4 540 aaKnown RBP14.65□□□□□ -0.06
USP42-207ENST00000521713 IKZF5Q9H5V7 419 aa14.65□□□□□ -0.06
USP42-207ENST00000521713 HLA-DOBP13765 273 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 TBPP20226 339 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 RANP62826 216 aaKnown RBP14.64□□□□□ -0.07
USP42-207ENST00000521713 CST9LP1Q5W188 147 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 SPNS2Q8IVW8 549 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 SLAMF6Q96DU3 332 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 BARHL1Q9BZE3 327 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 SPACA1Q9HBV2 294 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 TAS2R5Q9NYW4 299 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 GAB2Q9UQC2 676 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 BTBD17A6NE02 478 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 OR2W5A6NFC9 320 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 LGALS8O00214 317 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 PSMB6P28072 239 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 OR1S2Q8NGQ3 325 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 RNF167Q9H6Y7 350 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 SLC25A19Q9HC21 320 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 HINT3Q9NQE9 182 aaKnown RBP14.64□□□□□ -0.07
USP42-207ENST00000521713 PRKNO60260 465 aaPredicted RBP14.64□□□□□ -0.07
USP42-207ENST00000521713 CELA2BP08218 269 aaPredicted RBP14.64□□□□□ -0.07
USP42-207ENST00000521713 ABCD3P28288 659 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 ARRB2P32121 409 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 SNCAP37840 140 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 ZNF133P52736 654 aaPredicted RBP14.64□□□□□ -0.07
USP42-207ENST00000521713 AARDQ4LEZ3 155 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 ACER2Q5QJU3 275 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 ATPAF1Q5TC12 328 aaPredicted RBP14.64□□□□□ -0.07
USP42-207ENST00000521713 IL34Q6ZMJ4 242 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 SPRED2Q7Z698 418 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 SYS1Q8N2H4 156 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 COMMD1Q8N668 190 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 FAM71CQ8NEG0 241 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 GAR1Q9NY12 217 aaKnown RBP14.64□□□□□ -0.07
USP42-207ENST00000521713 ZMAT5Q9UDW3 170 aaKnown RBP14.64□□□□□ -0.07
USP42-207ENST00000521713 PRSS37A4D1T9 235 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 HSPB2A8KAH6 182 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 CEBPZOSA8MTT3 80 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 HSPB2Q16082 182 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 ZNF766Q5HY98 468 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 HSD17B11Q8NBQ5 300 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 OR13C8Q8NGS7 320 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 SDSLQ96GA7 329 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 CMTM3Q96MX0 182 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 UCK1Q9HA47 277 aa14.64□□□□□ -0.07
USP42-207ENST00000521713 HPNP05981 417 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 IL3RAP26951 378 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 RFC3P40938 356 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 EMDP50402 254 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 DGCR2P98153 550 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 KIRREL2Q6UWL6 708 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 BCDIN3DQ7Z5W3 292 aaKnown RBP14.63□□□□□ -0.07
USP42-207ENST00000521713 NKX3-1Q99801 234 aaPredicted RBP14.63□□□□□ -0.07
USP42-207ENST00000521713 GPR87Q9BY21 358 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 HRASLSQ9HDD0 168 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms