RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 FOXRED1Q96CU9 486 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC9-210ENST00000521667 FAM186AA6NE01 2351 aa16.26■□□□□ 0.19
TRAPPC9-210ENST00000521667 CEP250Q9BV73 2442 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 TMEM272A0A1B0GTI8 110 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 NKX2-8O15522 239 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 CTAG2O75638 210 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 CCNKO75909 580 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 KRT33AO76009 404 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 BDKRB2P30411 391 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 PPIAP62937 165 aaKnown RBP16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 ARG2P78540 354 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 DYRK1AQ13627 763 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 RIPPLY2Q5TAB7 128 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 LYPD6Q86Y78 171 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 ZFP62Q8NB50 900 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 OR1M1Q8NGA1 313 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 OR5D14Q8NGL3 314 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 HAS2Q92819 552 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 FBXO17Q96EF6 278 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 ALKBH3Q96Q83 286 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 KCNK15Q9H427 330 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 GPR84Q9NQS5 396 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 TMEM38BQ9NVV0 291 aa16.25■□□□□ 0.19
TRAPPC9-210ENST00000521667 IGKV3D-15A0A087WSY6 115 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 TRAPPC2P0DI81 140 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 TRAPPC2BP0DI82 140 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 ARSBP15848 533 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 ZNF20P17024 532 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 CCL1P22362 96 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 TATDN3Q17R31 274 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 ZNF813Q6ZN06 617 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 TMEM138Q9NPI0 162 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 DIABLOQ9NR28 239 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 RBMX2Q9Y388 322 aaKnown RBP16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 HMX3A6NHT5 357 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 ACOT7O00154 380 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 CST2P09228 141 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 ANOS1P23352 680 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 NHLH1Q02575 133 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 SRSF6Q13247 344 aaKnown RBP16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 ZNF529Q6P280 563 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 DOK3Q7L591 496 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 SCMH1Q96GD3 660 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 PGAM5Q96HS1 289 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 SORCS2Q96PQ0 1159 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 DPAGT1Q9H3H5 408 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 ZNF552Q9H707 407 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 PLEK2Q9NYT0 353 aa16.24■□□□□ 0.19
TRAPPC9-210ENST00000521667 GGT3PA6NGU5 568 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 F5H5K5 113 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 INMT-MINDY4F8WBC2 141 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 SYNGR4O95473 234 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 ECDO95905 644 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 RAB3AP20336 220 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 OTX1P32242 354 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 BCL2A1Q16548 175 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 ZNF766Q5HY98 468 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 UBASH3BQ8TF42 649 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 PHF21AQ96BD5 680 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 FAM71F1Q96KD3 344 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 SOX7Q9BT81 388 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 PAQR5Q9NXK6 330 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 RHBDD3Q9Y3P4 386 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 ZFHX4Q86UP3 3567 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 APOC1P02654 83 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 ITGB2P05107 769 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 PTHLHP12272 177 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 HLA-DMAP28067 261 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 AP3S2P59780 193 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 SNTB2Q13425 540 aaKnown RBP16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 CEACAM16Q2WEN9 425 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 ADGRE4PQ86SQ3 457 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 BIVMQ86UB2 503 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 FAM109AQ8N4B1 249 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 OR13C9Q8NGT0 318 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 FOXB1Q99853 325 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 GPR35Q9HC97 309 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 ACKR4Q9NPB9 350 aa16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 MCTS1Q9ULC4 181 aaKnown RBP16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 NOSIPQ9Y314 301 aaKnown RBP16.23■□□□□ 0.19
TRAPPC9-210ENST00000521667 CIB4A0PJX0 185 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 ABOP16442 354 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 SLC6A9P48067 706 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 CAPZA1P52907 286 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 SLC10A1Q14973 349 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 RAB35Q15286 201 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 RSPO1Q2MKA7 263 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 GFOD2Q3B7J2 385 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 DNM1P46Q6ZS02 220 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 TMPRSS7Q7RTY8 843 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 NAA40Q86UY6 237 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 TMEM178AQ8NBL3 297 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 OR52N4Q8NGI2 321 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 OR4D6Q8NGJ1 314 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 OR6F1Q8NGZ6 308 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 SPTSSAQ969W0 71 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 ATG5Q9H1Y0 275 aa16.22■□□□□ 0.19
TRAPPC9-210ENST00000521667 KLK11Q9UBX7 282 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms