RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 HIST1H3AP68431 136 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 ZMAT1Q5H9K5 638 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 HIST2H3PS2Q5TEC6 136 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 CFAP77Q6ZQR2 320 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 HIST2H3AQ71DI3 136 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 HDDC2Q7Z4H3 204 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 ATG16L2Q8NAA4 619 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 NPEPL1Q8NDH3 523 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 OR8G5Q8NG78 346 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 OR1F12Q8NHA8 337 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 STON2Q8WXE9 905 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 TPD52L3Q96J77 140 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 PKP2Q99959 881 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 NUDT16L1Q9BRJ7 211 aaKnown RBP9.16□□□□□ -0.94
CSMD1-210ENST00000521646 SEMA6AQ9H2E6 1030 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 CMTM6Q9NX76 183 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 NDRG4Q9ULP0 352 aaKnown RBP9.16□□□□□ -0.94
CSMD1-210ENST00000521646 TMCC3Q9ULS5 477 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 EFCAB9A8MZ26 197 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 SLC16A7O60669 478 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 EDF1O60869 148 aaKnown RBP9.15□□□□□ -0.94
CSMD1-210ENST00000521646 FAM20BO75063 409 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 KNG1P01042 644 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 IGHV4-59P01825 116 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 CD14P08571 375 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 PITPNBP48739 271 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 PROK1P58294 105 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 PCBD1P61457 104 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 GNB2P62879 340 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 GUCY1A3Q02108 690 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 SEC23BQ15437 767 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 OLFML2AQ68BL7 652 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 LRRN1Q6UXK5 716 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 COLCA1Q6ZS62 124 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 OAFQ86UD1 273 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 C1orf174Q8IYL3 243 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 OFCC1Q8IZS5 231 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 FAM156AQ8NDB6 213 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 OR8J3Q8NGG0 315 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 LINC01006Q8NI28 216 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 TSPEARQ8WU66 669 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 PTP4A1Q93096 173 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 NEIL1Q96FI4 390 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-210ENST00000521646 ATP6V1G3Q96LB4 118 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 RBM4BQ9BQ04 359 aaKnown RBP9.15□□□□□ -0.94
CSMD1-210ENST00000521646 POLR2J2Q9GZM3 115 aaKnown RBP9.15□□□□□ -0.94
CSMD1-210ENST00000521646 NUAK2Q9H093 628 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 POLR2J3Q9H1A7 115 aaKnown RBP9.15□□□□□ -0.94
CSMD1-210ENST00000521646 PNRC2Q9NPJ4 139 aaKnown RBP9.15□□□□□ -0.94
CSMD1-210ENST00000521646 ADA2Q9NZK5 511 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 VSX1Q9NZR4 365 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-210ENST00000521646 STX18Q9P2W9 335 aaKnown RBP9.15□□□□□ -0.94
CSMD1-210ENST00000521646 BAG5Q9UL15 447 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 SIGLEC7Q9Y286 467 aa9.15□□□□□ -0.94
CSMD1-210ENST00000521646 IGLV1-36A0A0B4J1U3 117 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 A6NIZ1 184 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 IQCF6A8MYZ5 107 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 FAM220BPB1ANY3 271 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 NDUFA7O95182 113 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 MTNR1AP48039 350 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 RAP1BP61224 184 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 RAP1AP62834 184 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 SELENOWP63302 87 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 SCRN3Q0VDG4 424 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 ST3GAL3Q11203 375 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 AQP6Q13520 282 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 KRR1Q13601 381 aaKnown RBP9.14□□□□□ -0.95
CSMD1-210ENST00000521646 GK2Q14410 553 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-210ENST00000521646 ZNF181Q2M3W8 571 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 SFRP4Q6FHJ7 346 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-210ENST00000521646 ZER1Q7Z7L7 766 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-210ENST00000521646 PDZD9Q8IXQ8 264 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 MUC20Q8N307 709 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-210ENST00000521646 SLC7A13Q8TCU3 470 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 RASSF5Q8WWW0 418 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 PCGF1Q9BSM1 259 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 SIRPDQ9H106 197 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 RABEP2Q9H5N1 569 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 RERGLQ9H628 205 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 PPP1R3EQ9H7J1 279 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 NRIP3Q9NQ35 241 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 UFSP2Q9NUQ7 469 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 COL7A1Q02388 2944 aa9.14□□□□□ -0.95
CSMD1-210ENST00000521646 A0A0G2JND7 137 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 A0A0U1RQK1 487 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 CLPSL1A2RUU4 121 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 SOCS2O14508 198 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 MRASO14807 208 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 PRB2P02812 416 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-210ENST00000521646 TNFSF4P23510 183 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 OMPP47874 163 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 KLF10Q13118 480 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 TAF9Q16594 264 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 ZBED5Q49AG3 693 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 FAM205BPQ63HN1 556 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 BTNL3Q6UXE8 466 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 UNQ6126/PRO20091Q6UXV3 157 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 ZNF826PQ6ZT77 177 aa9.13□□□□□ -0.95
CSMD1-210ENST00000521646 TMPRSS11FQ6ZWK6 438 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms