RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 IL17AQ16552 155 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 ZNF699Q32M78 642 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 PTPN20Q4JDL3 420 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 OGFRL1Q5TC84 451 aaPredicted RBP5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 MARC1Q5VT66 337 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 LEMD1Q68G75 181 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 OR8G2PQ6IF36 304 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 CDC42EP5Q6NZY7 148 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 ZNF836Q6ZNA1 936 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 Q6ZPB1 254 aaPredicted RBP5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 TMED4Q7Z7H5 227 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 LYG2Q86SG7 212 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 THOC6Q86W42 341 aaKnown RBP5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 RNF130Q86XS8 419 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 CRLF3Q8IUI8 442 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 FUNDC1Q8IVP5 155 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 C10orf107Q8IVU9 208 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 NRMQ8IXM6 262 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 BOD1L2Q8IYS8 172 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 C12orf45Q8N5I9 185 aaPredicted RBP5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 PROKR2Q8NFJ6 384 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 OR10W1Q8NGF6 305 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 OR8J3Q8NGG0 315 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 ZNF420Q8TAQ5 688 aaPredicted RBP5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 ITFG1Q8TB96 612 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 BLOC1S5Q8TDH9 187 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 SMARCD2Q92925 531 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 MED8Q96G25 268 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 SMIM10Q96HG1 83 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 PSMB7Q99436 277 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 DOK1Q99704 481 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 NPAS2Q99743 824 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 ATF6BQ99941 703 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 EBF4Q9BQW3 602 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 CHCHD5Q9BSY4 110 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 DCTN5Q9BTE1 182 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 DCUN1D5Q9BTE7 237 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 COMMD4Q9H0A8 199 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 MIXL1Q9H2W2 232 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 CDC42EP4Q9H3Q1 356 aaKnown RBP5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 ANKRA2Q9H9E1 313 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 RHOFQ9HBH0 211 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 HRASLSQ9HDD0 168 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 MCUBQ9NWR8 336 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 PAK5Q9P286 719 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 COPS7AQ9UBW8 275 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 SLC7A11Q9UPY5 501 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 ZNF337Q9Y3M9 751 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 ALG6Q9Y672 507 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 SF3B1O75533 1304 aaKnown RBP eCLIP5.37□□□□□ -1.556e-6■■■■■ 59.7
NUDCD1-204ENST00000521439 ROBO3Q96MS0 1386 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 PSME4Q14997 1843 aa5.37□□□□□ -1.55
NUDCD1-204ENST00000521439 A0A0G2JMP0 313 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 TMEM213A2RRL7 107 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 C9JVG2 144 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 RNASEK-C17orf49H0YIS7 233 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 MKRN2OSH3BPM6 223 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 TEX46H3BTG2 121 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 CDIPTO14735 213 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 TYROBPO43914 113 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 GGCTO75223 188 aaKnown RBP5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 ADAP1O75689 374 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 AQP8O94778 261 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 GOT2P00505 430 aaKnown RBP5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 CGAP01215 116 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 IFNA5P01569 189 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 FGGP02679 453 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 HIST1H2AGP0C0S8 130 aaPredicted RBP5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 UCHL3P15374 230 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 SLC6A1P30531 599 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 CHI3L1P36222 383 aaPredicted RBP5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 DDOSTP39656 456 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 PSMD8P48556 350 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 IDH2P48735 452 aaKnown RBP5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 CYB561P49447 251 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 RAB2AP61019 212 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 PKIAP61925 76 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 SLC7A9P82251 487 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 GTF2BQ00403 316 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 IL5RAQ01344 420 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 FGL1Q08830 312 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 KCNJ11Q14654 390 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 ZNF630Q2M218 657 aaPredicted RBP5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 EXOC3L2Q2M3D2 409 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 VPS26BQ4G0F5 336 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 XKR7Q5GH72 579 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 PIGGQ5H8A4 983 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 PABPC1L2AQ5JQF8 200 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 MUC21Q5SSG8 566 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 LCE1EQ5T753 118 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 OR2G6Q5TZ20 316 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 FBXW9Q5XUX1 488 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 TMEM220Q6QAJ8 160 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 DPY19L2P2Q6ZN68 376 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 GCNT7Q6ZNI0 430 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 SLC16A13Q7RTY0 426 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 FAM220AQ7Z4H9 259 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 TMEM135Q86UB9 458 aa5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.36□□□□□ -1.55
NUDCD1-204ENST00000521439 NAXDQ8IW45 347 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms