RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 MCUR1Q96AQ8 359 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 DACT3Q96B18 629 aaPredicted RBP16.43■□□□□ 0.22
PABPC1-215ENST00000520804 PLEKHA8Q96JA3 519 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 ZNF747Q9BV97 191 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 MS4A7Q9GZW8 240 aaPredicted RBP16.43■□□□□ 0.22
PABPC1-215ENST00000520804 FN3KQ9H479 309 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 PNRC2Q9NPJ4 139 aaKnown RBP16.43■□□□□ 0.22
PABPC1-215ENST00000520804 PCDHGB1Q9Y5G3 927 aa16.43■□□□□ 0.22
PABPC1-215ENST00000520804 IGHV2-70DA0A0C4DH43 119 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 IDH3BO43837 385 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 LCATP04180 440 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 IGHV4-38-2P0DP08 117 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 HSD17B1P14061 328 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 IFNGR2P38484 337 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 TRAP1Q12931 704 aaKnown RBP16.42■□□□□ 0.22
PABPC1-215ENST00000520804 MALLQ13021 153 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 MAB21L1Q13394 359 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 FAM201AQ5SY85 155 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 PARP8Q8N3A8 854 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 CELF2-AS1Q8N7Q2 184 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 SDR9C7Q8NEX9 313 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 OR8B3Q8NGG8 313 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 RAB40AQ8WXH6 277 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 UPRTQ96BW1 309 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 OR8B2Q96RD0 313 aa16.42■□□□□ 0.22
PABPC1-215ENST00000520804 HLA-DQA2P01906 255 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 FABP3P05413 133 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 RNASE1P07998 156 aaKnown RBP16.41■□□□□ 0.22
PABPC1-215ENST00000520804 IRF2P14316 349 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 RRM2P31350 389 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 CD200P41217 278 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 ZNF620Q6ZNG0 422 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 C9orf139Q6ZV77 190 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 NLRC3Q7RTR2 1065 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 Q8TCH9 128 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 GNPDA2Q8TDQ7 276 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 ERGIC1Q969X5 290 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 SLCO4A1Q96BD0 722 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 NSMCE2Q96MF7 247 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 MRPL22Q9NWU5 206 aaKnown RBP16.41■□□□□ 0.22
PABPC1-215ENST00000520804 KCNG2Q9UJ96 466 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 TMCC3Q9ULS5 477 aa16.41■□□□□ 0.22
PABPC1-215ENST00000520804 IGHV3OR16-10A0A075B7F0 116 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 KIR2DS1A0A191URI9 304 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 CLDN34H7C241 214 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 PLATP00750 562 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 MSX2P35548 267 aaPredicted RBP16.4■□□□□ 0.22
PABPC1-215ENST00000520804 MTNR1AP48039 350 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 PITPNBP48739 271 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 RAD23AP54725 363 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 TPTEP56180 551 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.4■□□□□ 0.22
PABPC1-215ENST00000520804 TSPAN31Q12999 210 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 SAMD4BQ5PRF9 694 aaKnown RBP16.4■□□□□ 0.22
PABPC1-215ENST00000520804 SLC35F1Q5T1Q4 408 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 PGBD2Q6P3X8 592 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 SHISA2Q6UWI4 295 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 PGAP1Q75T13 922 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 PGAM4Q8N0Y7 254 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 SLC25A28Q96A46 364 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 MAP6Q96JE9 813 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 IL1RAPQ9NPH3 570 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 CD300AQ9UGN4 299 aa16.4■□□□□ 0.22
PABPC1-215ENST00000520804 M0R135 149 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 ARPC2O15144 300 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 SNX3O60493 162 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 ZNF823P16415 610 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 SLC9A3R2Q15599 337 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 CLEC12AQ5QGZ9 265 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 LYPD2Q6UXB3 125 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 DCDC5Q6ZRR9 648 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 MRPL21Q7Z2W9 205 aaKnown RBP16.39■□□□□ 0.21
PABPC1-215ENST00000520804 OR11L1Q8NGX0 322 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 SPRYD4Q8WW59 207 aaPredicted RBP16.39■□□□□ 0.21
PABPC1-215ENST00000520804 SPTSSAQ969W0 71 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 ZNF799Q96GE5 643 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 DDOQ99489 341 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 FAM107BQ9H098 131 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 NSRP1Q9H0G5 558 aaKnown RBP16.39■□□□□ 0.21
PABPC1-215ENST00000520804 CLN8Q9UBY8 286 aa16.39■□□□□ 0.21
PABPC1-215ENST00000520804 SOX21Q9Y651 276 aaPredicted RBP16.39■□□□□ 0.21
PABPC1-215ENST00000520804 TRAV40A0A0B4J280 105 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 TMPRSS2O15393 492 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 FAM20BO75063 409 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 PYCR1P32322 319 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 MPPED2Q15777 294 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 PRR31Q5SQ13 230 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 PRAMEF6Q5VXH4 476 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 WDR25Q64LD2 544 aaPredicted RBP16.38■□□□□ 0.21
PABPC1-215ENST00000520804 FITM2Q8N6M3 262 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 C19orf18Q8NEA5 215 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 OR10S1Q8NGN2 331 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 CDRT15Q96T59 188 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 NUDT16L1Q9BRJ7 211 aaKnown RBP16.38■□□□□ 0.21
PABPC1-215ENST00000520804 SLC22A4Q9H015 551 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 EGLN3Q9H6Z9 239 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 NOP16Q9Y3C1 178 aaKnown RBP16.38■□□□□ 0.21
PABPC1-215ENST00000520804 CDH10Q9Y6N8 788 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 DOCK11Q5JSL3 2073 aa16.38■□□□□ 0.21
PABPC1-215ENST00000520804 CD300LBA8K4G0 201 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms