RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 ODF4Q2M2E3 257 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 GFOD2Q3B7J2 385 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 TMEM244Q5VVB8 128 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 ALKBH2Q6NS38 261 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 XKRXQ6PP77 449 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 ZNF584Q8IVC4 421 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 ELMOD2Q8IZ81 293 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 PRSS35Q8N3Z0 413 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 ZNF808Q8N4W9 903 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-208ENST00000520561 FAM169BQ8N8A8 192 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 IL17RDQ8NFM7 739 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 OR8B12Q8NGG6 310 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 OR52H1Q8NGJ2 320 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 GPR148Q8TDV2 347 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 TSEN15Q8WW01 171 aaKnown RBP7.78□□□□□ -1.16
CSMD1-208ENST00000520561 TMEM203Q969S6 136 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 RNF166Q96A37 237 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-208ENST00000520561 APOBEC3DQ96AK3 386 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-208ENST00000520561 ISOC1Q96CN7 298 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 MS4A3Q96HJ5 214 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 POM121L2Q96KW2 1035 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 KCNS3Q9BQ31 491 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 PDCD1LG2Q9BQ51 273 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 RBM38Q9H0Z9 239 aaKnown RBP7.78□□□□□ -1.16
CSMD1-208ENST00000520561 RGCCQ9H4X1 137 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 SLC24A3Q9HC58 644 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 CRNNQ9UBG3 495 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-208ENST00000520561 HHLA2Q9UM44 414 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 SLC22A13Q9Y226 551 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 GSTK1Q9Y2Q3 226 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 SF3B6Q9Y3B4 125 aaKnown RBP7.78□□□□□ -1.16
CSMD1-208ENST00000520561 CEPT1Q9Y6K0 416 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 POLEQ07864 2286 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 ITPR1Q14643 2758 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 DSPP15924 2871 aaKnown RBP7.78□□□□□ -1.16
CSMD1-208ENST00000520561 ATMQ13315 3056 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 LOC100509620A0A075B734 347 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 TRDV1A0A1B0GX56 115 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 H3BSA7 217 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 J3QW42 95 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 ZNF701M0R085 212 aaPredicted RBP7.77□□□□□ -1.17
CSMD1-208ENST00000520561 M0R1B8 84 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 P2RY10O00398 339 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 GABRPO00591 440 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 XRCC2O43543 280 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 SYT7O43581 403 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 ZG16O60844 167 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 GATBO75879 557 aaKnown RBP7.77□□□□□ -1.17
CSMD1-208ENST00000520561 CLDN14O95500 239 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 IGLV1-44P01699 117 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 CD2P06729 351 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 CELA3BP08861 270 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 CECR9P0C854 216 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 CCL2P13500 99 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 ZNF12P17014 697 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 GALP22466 123 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 NR4A1P22736 598 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 MYL9P24844 172 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 ZNF83P51522 516 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 HGFACQ04756 655 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 MALLQ13021 153 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 C3orf36Q3SXR2 165 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 PAMR1Q6UXH9 720 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 UNQ6126/PRO20091Q6UXV3 157 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 GDPGP1Q6ZNW5 385 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 SLC16A12Q6ZSM3 486 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 PRSS45Q7RTY3 260 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 WFDC8Q8IUA0 241 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 OR13C5Q8NGS8 318 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 ITLN2Q8WWU7 325 aaPredicted RBP7.77□□□□□ -1.17
CSMD1-208ENST00000520561 RPL3LQ92901 407 aaKnown RBP7.77□□□□□ -1.17
CSMD1-208ENST00000520561 ZNF75AQ96N20 296 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 MED18Q9BUE0 208 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 C1QTNF6Q9BXI9 259 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 NAA50Q9GZZ1 169 aaKnown RBP7.77□□□□□ -1.17
CSMD1-208ENST00000520561 OR51E2Q9H255 320 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 PLEKHA1Q9HB21 404 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 NGBQ9NPG2 151 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 EIF3KQ9UBQ5 218 aaKnown RBP7.77□□□□□ -1.17
CSMD1-208ENST00000520561 NDRG3Q9UGV2 375 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 ZNF391Q9UJN7 358 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 DHDHQ9UQ10 334 aa7.77□□□□□ -1.17
CSMD1-208ENST00000520561 RP1L1Q8IWN7 2480 aaPredicted RBP7.77□□□□□ -1.17
CSMD1-208ENST00000520561 NCOA6Q14686 2063 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-208ENST00000520561 IGHV1-18A0A0C4DH31 117 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 TRBV5-5A0A0J9YX44 114 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 A0A0U1RQV5 110 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 H3BMQ9 156 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 SLC22A1O15245 554 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 GPX5O75715 221 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 ARL6IP5O75915 188 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 ATE1O95260 518 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 ISG15P05161 165 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 OCM2P0CE71 109 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 CFL1P23528 166 aaKnown RBP7.76□□□□□ -1.17
CSMD1-208ENST00000520561 CRYBB2P43320 205 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 LSM3P62310 102 aaKnown RBP7.76□□□□□ -1.17
CSMD1-208ENST00000520561 FABP5Q01469 135 aa7.76□□□□□ -1.17
CSMD1-208ENST00000520561 RSPO1Q2MKA7 263 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-208ENST00000520561 SNAI3Q3KNW1 292 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms