RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 ELAC2Q9BQ52 826 aaKnown RBP12.69□□□□□ -0.38
CSMD1-207ENST00000520451 MYLK2Q9H1R3 596 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 FN3KQ9H479 309 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 GORASP2Q9H8Y8 452 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 A0A1B0GWJ7 208 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 TMPRSS2O15393 492 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 WIPF1O43516 503 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 LCATP04180 440 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 SEMG1P04279 462 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 RNASE1P07998 156 aaKnown RBP12.68□□□□□ -0.38
CSMD1-207ENST00000520451 PPIAL4GP0DN37 164 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 IRF2P14316 349 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 PRDX6P30041 224 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 MTNR1AP48039 350 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 PITPNBP48739 271 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 MALLQ13021 153 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 GK2Q14410 553 aaPredicted RBP12.68□□□□□ -0.38
CSMD1-207ENST00000520451 ZBTB46Q86UZ6 589 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 SDR9C7Q8NEX9 313 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 SLC25A28Q96A46 364 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 MCUR1Q96AQ8 359 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 UPRTQ96BW1 309 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 MED4Q9NPJ6 270 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 CYB5R1Q9UHQ9 305 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 MAGEL2Q9UJ55 1249 aa12.68□□□□□ -0.38
CSMD1-207ENST00000520451 PKD1L1Q8TDX9 2849 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 TRAV40A0A0B4J280 105 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 OR6C68A6NDL8 312 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 FSTL3O95633 263 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 GGT2P36268 569 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 IFNGR2P38484 337 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 GATA4P43694 442 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 MAB21L1Q13394 359 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 SLC9A3R2Q15599 337 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 SLC35F1Q5T1Q4 408 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 C9orf139Q6ZV77 190 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 PGAP1Q75T13 922 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 NAA40Q86UY6 237 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 OR11L1Q8NGX0 322 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 SPRYD4Q8WW59 207 aaPredicted RBP12.67□□□□□ -0.38
CSMD1-207ENST00000520451 DACT3Q96B18 629 aaPredicted RBP12.67□□□□□ -0.38
CSMD1-207ENST00000520451 SLCO4A1Q96BD0 722 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 PNRC2Q9NPJ4 139 aaKnown RBP12.67□□□□□ -0.38
CSMD1-207ENST00000520451 CLN8Q9UBY8 286 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 TMCC3Q9ULS5 477 aa12.67□□□□□ -0.38
CSMD1-207ENST00000520451 SOX21Q9Y651 276 aaPredicted RBP12.67□□□□□ -0.38
CSMD1-207ENST00000520451 TRRAPQ9Y4A5 3859 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 KIR2DS1A0A191URI9 304 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 CLDN34H7C241 214 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 IDH3BO43837 385 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 FAM20BO75063 409 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 PLATP00750 562 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 FABP3P05413 133 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 RRM2P31350 389 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 CD200P41217 278 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 GSSP48637 474 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 TPTEP56180 551 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.66□□□□□ -0.38
CSMD1-207ENST00000520451 PRR31Q5SQ13 230 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 PRAMEF6Q5VXH4 476 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 LYPD2Q6UXB3 125 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 ZNF620Q6ZNG0 422 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 DCDC5Q6ZRR9 648 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 MRPL21Q7Z2W9 205 aaKnown RBP12.66□□□□□ -0.38
CSMD1-207ENST00000520451 CELF2-AS1Q8N7Q2 184 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 C19orf18Q8NEA5 215 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 Q8TCH9 128 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 GNPDA2Q8TDQ7 276 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 ERGIC1Q969X5 290 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 NSMCE2Q96MF7 247 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 NUDT16L1Q9BRJ7 211 aaKnown RBP12.66□□□□□ -0.38
CSMD1-207ENST00000520451 FAM107BQ9H098 131 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 UNKLQ9H9P5 680 aaKnown RBP12.66□□□□□ -0.38
CSMD1-207ENST00000520451 UFSP2Q9NUQ7 469 aa12.66□□□□□ -0.38
CSMD1-207ENST00000520451 MRPL22Q9NWU5 206 aaKnown RBP12.66□□□□□ -0.38
CSMD1-207ENST00000520451 MDFIC2A0A1B0GVS7 189 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 M0R135 149 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 PHYHO14832 338 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 ARPC2O15144 300 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 HSD17B1P14061 328 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 ZNF823P16415 610 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 PYCR1P32322 319 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 MSX2P35548 267 aaPredicted RBP12.65□□□□□ -0.38
CSMD1-207ENST00000520451 RAD23AP54725 363 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 IL13RA1P78552 427 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 TSPAN31Q12999 210 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 OR8G1Q15617 311 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 CLEC12AQ5QGZ9 265 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 WDR25Q64LD2 544 aaPredicted RBP12.65□□□□□ -0.38
CSMD1-207ENST00000520451 PGBD2Q6P3X8 592 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 FITM2Q8N6M3 262 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 PROKR2Q8NFJ6 384 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 SPTSSAQ969W0 71 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 ZNF799Q96GE5 643 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 MAP6Q96JE9 813 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 NSRP1Q9H0G5 558 aaKnown RBP12.65□□□□□ -0.38
CSMD1-207ENST00000520451 MMADHCQ9H3L0 296 aaPredicted RBP12.65□□□□□ -0.38
CSMD1-207ENST00000520451 KCNG2Q9UJ96 466 aa12.65□□□□□ -0.38
CSMD1-207ENST00000520451 NOP16Q9Y3C1 178 aaKnown RBP12.65□□□□□ -0.38
CSMD1-207ENST00000520451 TVP23AA6NH52 213 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms