RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 MAGIXQ9H6Y5 334 aa13.24□□□□□ -0.29
MRPS28-204ENST00000519120 TMEM165Q9HC07 324 aa13.24□□□□□ -0.29
MRPS28-204ENST00000519120 MIOXQ9UGB7 285 aa13.24□□□□□ -0.29
MRPS28-204ENST00000519120 OR5V1Q9UGF6 321 aa13.24□□□□□ -0.29
MRPS28-204ENST00000519120 NUP50Q9UKX7 468 aa13.24□□□□□ -0.29
MRPS28-204ENST00000519120 F5H5K5 113 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 H0YL77 283 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 M0R135 149 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 TNFRSF11BO00300 401 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 LCATP04180 440 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 ZNF823P16415 610 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 CFPP27918 469 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 CD200P41217 278 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 SEC61A1P61619 476 aaKnown RBP13.23□□□□□ -0.29
MRPS28-204ENST00000519120 MXRA7P84157 204 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 ZNF404Q494X3 552 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 ARMCX4Q5H9R4 360 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 ZNF362Q5T0B9 420 aaPredicted RBP13.23□□□□□ -0.29
MRPS28-204ENST00000519120 SLC35F1Q5T1Q4 408 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 PGAP1Q75T13 922 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 LNX2Q8N448 690 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 ZDHHC22Q8N966 263 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 BHLHE23Q8NDY6 225 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 OR4C15Q8NGM1 316 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 ZNF420Q8TAQ5 688 aaPredicted RBP13.23□□□□□ -0.29
MRPS28-204ENST00000519120 Q8TCH9 128 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 GCDHQ92947 438 aaPredicted RBP13.23□□□□□ -0.29
MRPS28-204ENST00000519120 SPTSSAQ969W0 71 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 ZNF799Q96GE5 643 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 PLEKHA8Q96JA3 519 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 MAP6Q96JE9 813 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 BTBD10Q9BSF8 475 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 FN3KQ9H479 309 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 EGLN3Q9H6Z9 239 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 BAIAP2Q9UQB8 552 aa13.23□□□□□ -0.29
MRPS28-204ENST00000519120 F5H5P2 479 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 RGS9O75916 674 aaPredicted RBP13.22□□□□□ -0.29
MRPS28-204ENST00000519120 RPS2P15880 293 aaKnown RBP13.22□□□□□ -0.29
MRPS28-204ENST00000519120 PAX2Q02962 417 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 PAX8Q06710 450 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 PCK2Q16822 640 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 TEX30Q5JUR7 227 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 CLEC12AQ5QGZ9 265 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 LCN8Q6JVE9 175 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 DRAM2Q6UX65 266 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 DOK3Q7L591 496 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 MOGAT3Q86VF5 341 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 KLBQ86Z14 1044 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 PLPP7Q8NBV4 271 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 PROKR2Q8NFJ6 384 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 OR9Q2Q8NGE9 314 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 DACT3Q96B18 629 aaPredicted RBP13.22□□□□□ -0.29
MRPS28-204ENST00000519120 ZMYND19Q96E35 227 aaPredicted RBP13.22□□□□□ -0.29
MRPS28-204ENST00000519120 NEIL1Q96FI4 390 aaPredicted RBP13.22□□□□□ -0.29
MRPS28-204ENST00000519120 SSBP3Q9BWW4 388 aaPredicted RBP13.22□□□□□ -0.29
MRPS28-204ENST00000519120 OPA3Q9H6K4 179 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 WDR76Q9H967 626 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 ZMAT3Q9HA38 289 aaKnown RBP13.22□□□□□ -0.29
MRPS28-204ENST00000519120 ESM1Q9NQ30 184 aa13.22□□□□□ -0.29
MRPS28-204ENST00000519120 TENM1Q9UKZ4 2725 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 TCRBV5S2A0A599 114 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 CCNB2O95067 398 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 PTBP3O95758 552 aaKnown RBP13.21□□□□□ -0.29
MRPS28-204ENST00000519120 CYB5R3P00387 301 aaPredicted RBP13.21□□□□□ -0.29
MRPS28-204ENST00000519120 IRF2P14316 349 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 ATP6V1B2P21281 511 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 SLC25A1P53007 311 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 RAD23AP54725 363 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 UBA52P62987 128 aaKnown RBP13.21□□□□□ -0.29
MRPS28-204ENST00000519120 MAB21L1Q13394 359 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 GK3PQ14409 553 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 KLF17Q5JT82 389 aaPredicted RBP13.21□□□□□ -0.29
MRPS28-204ENST00000519120 LRRN1Q6UXK5 716 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 CYP2R1Q6VVX0 501 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 RBMS3Q6XE24 437 aaKnown RBP13.21□□□□□ -0.29
MRPS28-204ENST00000519120 NLRC3Q7RTR2 1065 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 MRPL21Q7Z2W9 205 aaKnown RBP13.21□□□□□ -0.29
MRPS28-204ENST00000519120 NAA40Q86UY6 237 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 SLC37A3Q8NCC5 494 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 OR8D4Q8NGM9 314 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 OR10S1Q8NGN2 331 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 SLCO4A1Q96BD0 722 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 TMEM246Q9BRR3 403 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 DGCR6LQ9BY27 220 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 PLA2G12AQ9BZM1 189 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 PPIAL4AQ9Y536 164 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 COMMD3-BMI1R4GMX3 469 aa13.21□□□□□ -0.29
MRPS28-204ENST00000519120 NBEAL1Q6ZS30 2694 aa13.21□□□□□ -0.3
MRPS28-204ENST00000519120 WNK2Q9Y3S1 2297 aa13.2□□□□□ -0.3
MRPS28-204ENST00000519120 IGHV2-70DA0A0C4DH43 119 aa13.2□□□□□ -0.3
MRPS28-204ENST00000519120 CD300LBA8K4G0 201 aa13.2□□□□□ -0.3
MRPS28-204ENST00000519120 GMDSO60547 372 aa13.2□□□□□ -0.3
MRPS28-204ENST00000519120 GASTP01350 101 aa13.2□□□□□ -0.3
MRPS28-204ENST00000519120 FMO3P31513 532 aa13.2□□□□□ -0.3
MRPS28-204ENST00000519120 PYCR1P32322 319 aa13.2□□□□□ -0.3
MRPS28-204ENST00000519120 RBMXP38159 391 aaKnown RBP13.2□□□□□ -0.3
MRPS28-204ENST00000519120 PMELP40967 661 aa13.2□□□□□ -0.3
MRPS28-204ENST00000519120 BLVRAP53004 296 aa13.2□□□□□ -0.3
MRPS28-204ENST00000519120 GNB2P62879 340 aa13.2□□□□□ -0.3
MRPS28-204ENST00000519120 DBPQ10586 325 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms