RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 DRD5P21918 477 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 CHKAP35790 457 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 FRKP42685 505 aaPredicted RBP-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 CEBPDP49716 269 aaPredicted RBP-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 SKP2Q13309 424 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 ENDOGQ14249 297 aaKnown RBP-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 MAPRE1Q15691 268 aaKnown RBP-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 MICBQ29980 383 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 PLPPR5Q32ZL2 321 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 TTMPQ5BVD1 217 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 NEK5Q6P3R8 708 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 SLC39A4Q6P5W5 647 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 ZNF738Q8NE65 137 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 OR1M1Q8NGA1 313 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 OR10AD1Q8NGE0 317 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 OR10P1Q8NGE3 313 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 RERGQ96A58 199 aaPredicted RBP-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 MRGPRFQ96AM1 343 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 ZNF558Q96NG5 402 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 POLR3FQ9H1D9 316 aaPredicted RBP-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 SEC14L3Q9UDX4 400 aa-2.47□□□□□ -2.8
SNORA40.16-201ENST00000517238 HTTP42858 3142 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 TMSB15BA0A087X1C1 80 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 CLOCKO15516 846 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 UGT2B17O75795 530 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 CA3P07451 260 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 LDHCP07864 332 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 SETSIPP0DME0 302 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 H2AFXP16104 143 aaPredicted RBP-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 CNTFP26441 200 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 STIP1P31948 543 aaKnown RBP-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 HRH1P35367 487 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 IDH3GP51553 393 aaPredicted RBP-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 OR4D2P58180 307 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 RPL23P62829 140 aaKnown RBP-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 RGS1Q08116 209 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 AIMP2Q13155 320 aaKnown RBP-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 EPC2Q52LR7 807 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 CCDC158Q5M9N0 1113 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 TMEM42Q69YG0 159 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 MZT2BQ6NZ67 158 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 SBSNQ6UWP8 590 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 CYP26C1Q6V0L0 522 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 SLC22A16Q86VW1 577 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 ANGPTL5Q86XS5 388 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 FCGR1BQ92637 280 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 ITFG2Q969R8 447 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 SNX21Q969T3 373 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 ZUFSPQ96AP4 578 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 SEC22AQ96IW7 307 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 DRC1Q96MC2 740 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 NPY6RQ99463 290 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 KATNB1Q9BVA0 655 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 NSMCE4AQ9NXX6 385 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 MRPL15Q9P015 296 aaKnown RBP-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 CYTH4Q9UIA0 394 aa-2.48□□□□□ -2.81
SNORA40.16-201ENST00000517238 RTL1A6NKG5 1358 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 RP1P56715 2156 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 SPG11Q96JI7 2443 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 TRGV5A0A0B4J1U4 118 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 TRAV8-6A0A0B4J262 113 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 A0A0B4J2A0 478 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 A0A1B0GUS0 222 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 LOC102725191A0A1B0GVB3 256 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 TSPAN11A1L157 253 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 ANKRD30BLA7E2S9 258 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 LOC110117498-PIK3R3F6TDL0 507 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 TOM1O60784 492 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 PGLYRP1O75594 196 aaPredicted RBP-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 PDHBP11177 359 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 MUTP22033 750 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 PSMA4P25789 261 aaKnown RBP-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 FOXN2P32314 431 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 RORAP35398 523 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 NPY2RP49146 381 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 ETV1P50549 477 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 CCR9P51686 369 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 SUB1P53999 127 aaKnown RBP eCLIP-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 HERVK_113P63132 956 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 ERVK-8P63133 956 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 ERVK-25P63136 954 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 ZNF90Q03938 601 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 SRYQ05066 204 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 MXD4Q14582 209 aaPredicted RBP-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 WTAPQ15007 396 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 BCL2A1Q16548 175 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 NIPAL1Q6NVV3 410 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 CASC4Q6P4E1 433 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 RGS9BPQ6ZS82 235 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 KLHL7Q8IXQ5 586 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 SLC22A24Q8N4F4 322 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 KIF2BQ8N4N8 673 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 CSGALNACT2Q8N6G5 542 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 OR1L1Q8NH94 360 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 ASB13Q8WXK3 278 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 FAM131CQ96AQ9 280 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 EVI5LQ96CN4 794 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 RASL10BQ96S79 203 aa-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 MRPL45Q9BRJ2 306 aaKnown RBP-2.49□□□□□ -2.81
SNORA40.16-201ENST00000517238 EDEM2Q9BV94 578 aa-2.49□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms