RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 FARSAQ9Y285 508 aaKnown RBP-1.86□□□□□ -2.71
SNORA40.13-201ENST00000516379 TRAPPC1Q9Y5R8 145 aa-1.86□□□□□ -2.71
SNORA40.13-201ENST00000516379 PLXNB3Q9ULL4 1909 aa-1.86□□□□□ -2.71
SNORA40.13-201ENST00000516379 SMIM30A4D0T7 59 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 EIF4E2O60573 245 aaKnown RBP-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 EIF3GO75821 320 aaKnown RBP eCLIP-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 MT-ND4P03905 459 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 CRYGBP07316 175 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 SLC2A5P22732 501 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 PSMB9P28065 219 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 POLR2IP36954 125 aaKnown RBP-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 CFHR2P36980 270 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 CYP24A1Q07973 514 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 FILIP1LQ4L180 1135 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 FAM133BQ5BKY9 247 aaKnown RBP-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 GALNTL5Q7Z4T8 443 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 LHFPL4Q7Z7J7 247 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 ZNF410Q86VK4 478 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 CLEC4FQ8N1N0 589 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 FAM133AQ8N9E0 248 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 OR52H1Q8NGJ2 320 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 KCNG3Q8TAE7 436 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 ITLN2Q8WWU7 325 aaPredicted RBP-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 EEF1AKMT3Q96AZ1 226 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 MS4A4EQ96PG1 132 aa-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 PDP1Q9P0J1 537 aaPredicted RBP-1.87□□□□□ -2.71
SNORA40.13-201ENST00000516379 LPAP08519 4548 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 MAP1AP78559 2803 aaPredicted RBP-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 SNRNP200O75643 2136 aaKnown RBP-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 OR5B21A6NL26 309 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 MAS1P04201 325 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 IL12BP29460 328 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 PRDX6P30041 224 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 HTR2BP41595 481 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 PRR3P79522 188 aaKnown RBP-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 CLINT1Q14677 625 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 NNATQ16517 81 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 SPIN4Q56A73 249 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 NOXRED1Q6NXP6 359 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 LINC00696Q6ZRV3 163 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 SCXQ7RTU7 201 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 TMEM144Q7Z5S9 345 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 CBWD2Q8IUF1 395 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 TMEM185AQ8NFB2 350 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 OR10AD1Q8NGE0 317 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 OR10R2Q8NGX6 335 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 DQX1Q8TE96 717 aaKnown RBP-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 DEPDC1BQ8WUY9 529 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 DCPSQ96C86 337 aaKnown RBP-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 PIK3IP1Q96FE7 263 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 NEUROG2Q9H2A3 272 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 PLEKHF2Q9H8W4 249 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 CYP3A43Q9HB55 503 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 TRMT112Q9UI30 125 aaKnown RBP-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 TMCO1Q9UM00 188 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 ST3GAL6Q9Y274 331 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 GSTK1Q9Y2Q3 226 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 AK9Q5TCS8 1911 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 CARMIL1Q5VZK9 1371 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 LAMA5O15230 3695 aa-1.88□□□□□ -2.71
SNORA40.13-201ENST00000516379 APC2O95996 2303 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 A0A1W2PPM0 123 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 A4D1N5 150 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 ARRDC5A6NEK1 342 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 ZNF729A6NN14 1252 aaPredicted RBP-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 TRGV3P03979 118 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 FGF1P05230 155 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 CNTFRP26992 372 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 STX1BP61266 288 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 RPS15AP62244 130 aaKnown RBP-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 MXD1Q05195 221 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 ARHGAP19Q14CB8 494 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 CDK5R1Q15078 307 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 RALBP1Q15311 655 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 GUSBP1Q15486 140 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 KCTD21Q4G0X4 260 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 C1orf220Q5T0J3 134 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 MFSD4BQ5TF39 518 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 CNSTQ6PJW8 725 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 Q6ZPB1 254 aaPredicted RBP-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 CCDC65Q8IXS2 484 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 SYCP3Q8IZU3 236 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 SLC25A29Q8N8R3 303 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 OR10G6Q8NH81 332 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 GHSRQ92847 366 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 TMIGD2Q96BF3 282 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 PINX1Q96BK5 328 aaKnown RBP-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 Q96M85 177 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 OBSCN-AS1Q96MR7 158 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 CHMP4AQ9BY43 222 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 ZWILCHQ9H900 591 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 NKIRAS2Q9NYR9 191 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 IL36GQ9NZH8 169 aa-1.89□□□□□ -2.71
SNORA40.13-201ENST00000516379 TMEM131Q92545 1883 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 TRPM3Q9HCF6 1732 aaPredicted RBP-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 BTBD17A6NE02 478 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 CENPBD1B2RD01 187 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 RGS16O15492 202 aaPredicted RBP-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 ERI3O43414 337 aaKnown RBP-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 LRATO95237 230 aa-1.9□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms