RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 IGHV1-58A0A0C4DH39 117 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 A0A0J9YVX5 310 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GOLGA8QA0A0J9YX86 632 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 A0A0J9YYE9 177 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 LOC102725191A0A1B0GVB3 256 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TRBV6-4A0A1B0GX49 114 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TRBC2A0A5B9 178 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CIB4A0PJX0 185 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GOLGA8OA6NCC3 632 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GOLGA6L9A6NEM1 432 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 OR5K3A6NET4 321 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CCDC160A6NGH7 325 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 DDTLA6NHG4 134 aaPredicted RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CD300LBA8K4G0 201 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SNURFLB1AK76 121 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GOLGA8NF8WBI6 632 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 H0YAE9 185 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 hCG_1984214I3L0E3 225 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 K7EPK0 472 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PSMD9O00233 223 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 KPNA3O00505 521 aaPredicted RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 KPNA4O00629 521 aaPredicted RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TSPAN4O14817 238 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TEX28O15482 410 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PHGDHO43175 533 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SULT1B1O43704 296 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 KDELR3O43731 214 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SGTAO43765 313 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RRP9O43818 475 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ZBTB14O43829 449 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ORC5O43913 435 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 NUPR1O60356 82 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 NME2P1O60361 137 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 OR1I1O60431 355 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 KLHL41O60662 606 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 KPNA6O60684 536 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PFKFB2O60825 505 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 EFCAB14O75071 495 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CAND2O75155 1236 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GLRA3O75311 464 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 MED24O75448 989 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 STX11O75558 287 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CLEC3AO75596 197 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RAD51DO75771 328 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RPP40O75818 363 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 OR2J2O76002 312 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 INMTO95050 263 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 KCNK2O95069 426 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SLC25A14O95258 325 aaPredicted RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 NDST3O95803 873 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 IGSF6O95976 241 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 HAND1O96004 215 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 MT-CYBP00156 380 aaPredicted RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 HRASP01112 189 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 KRASP01116 189 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GASTP01350 101 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 IFNA14P01570 189 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TRBC1P01850 177 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ASLP04424 464 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RPN1P04843 607 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RPLP0P05388 317 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GALTP07902 379 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ABHD2P08910 425 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 LTA4HP09960 611 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 IQCF3P0C7M6 154 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ZNF728P0DKX0 622 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TMIGD3P0DMS9 266 aaPredicted RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CT45A10P0DMU9 189 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 IGHV3-30-3P0DP02 117 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 IGHV3-43DP0DP04 118 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 BCL2P10415 239 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CHGAP10645 457 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ATF4P18848 351 aaPredicted RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 COX7A1P24310 79 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ATP5A1P25705 553 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SMARCA1P28370 1054 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 IMPA1P29218 277 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 HPDP32754 393 aaPredicted RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 KDELR2P33947 212 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 MCM4P33991 863 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GABRA3P34903 492 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 DDIT3P35638 169 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 EIF4A3P38919 411 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 EIF2S3P41091 472 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PRCPP42785 496 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ASMTP46597 345 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RPL5P46777 297 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 OR3A2P47893 321 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CCT3P49368 545 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CAMPP49913 170 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CDK9P50750 372 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 NDUFA8P51970 172 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ARHGDIBP52566 201 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 EIF3BP55884 814 aaKnown RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CMC4P56277 68 aaPredicted RBP-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 OR2B6P58173 313 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 MTPNP58546 118 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TAS2R31P59538 309 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GPX6P59796 221 aa-0.94□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TMEM258P61165 79 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms