RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 LOC100289279A0A1B0GTE1 492 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 LRP5LA4QPB2 252 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 FAM183AA6NL82 134 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 G3V2T6 193 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 IFNL4K9M1U5 179 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 PPIHO43447 177 aaKnown RBP10.84□□□□□ -0.67
CLCN3-210ENST00000515420 LMX1BO60663 402 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 CDC14BO60729 498 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 APOC1P02654 83 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 LCATP04180 440 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 PSKH1P11801 424 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 RPS27P42677 84 aaKnown RBP10.84□□□□□ -0.67
CLCN3-210ENST00000515420 DAPP51397 102 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 CDH15P55291 814 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 GRB2P62993 217 aaKnown RBP10.84□□□□□ -0.67
CLCN3-210ENST00000515420 TNFAIP6P98066 277 aaPredicted RBP10.84□□□□□ -0.67
CLCN3-210ENST00000515420 HLXQ14774 488 aaPredicted RBP10.84□□□□□ -0.67
CLCN3-210ENST00000515420 TRIP10Q15642 601 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 KDM4DQ6B0I6 523 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 Q6ZR03 302 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 TIGD4Q8IY51 512 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 LINC01356Q8N9X3 169 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 OR6N2Q8NGY6 317 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 OR13G1Q8NGZ3 307 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 CLDND2Q8NHS1 167 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 RNF133Q8WVZ7 376 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 ZNF582Q96NG8 517 aaPredicted RBP10.84□□□□□ -0.67
CLCN3-210ENST00000515420 COPS4Q9BT78 406 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 MED20Q9H944 212 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 DYSFO75923 2080 aa10.84□□□□□ -0.67
CLCN3-210ENST00000515420 B4DSR2 109 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 EBAG9O00559 213 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 PCMT1P22061 227 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 SLC2A5P22732 501 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 SLC6A9P48067 706 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 ACTR3P61158 418 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 EIF2B1Q14232 305 aaKnown RBP10.83□□□□□ -0.68
CLCN3-210ENST00000515420 GK2Q14410 553 aaPredicted RBP10.83□□□□□ -0.68
CLCN3-210ENST00000515420 PTGES3Q15185 160 aaKnown RBP10.83□□□□□ -0.68
CLCN3-210ENST00000515420 TAF13Q15543 124 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 CHRFAM7AQ494W8 412 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 PLBD1Q6P4A8 553 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 PGAP1Q75T13 922 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 CXXC5Q7LFL8 322 aaKnown RBP10.83□□□□□ -0.68
CLCN3-210ENST00000515420 DPY19L4Q7Z388 723 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 ERI1Q8IV48 349 aaKnown RBP10.83□□□□□ -0.68
CLCN3-210ENST00000515420 CPOQ8IVL8 374 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 ZNF454Q8N9F8 522 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 OR2Z1Q8NG97 314 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 RAB1CQ92928 201 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 CENPNQ96H22 339 aaPredicted RBP10.83□□□□□ -0.68
CLCN3-210ENST00000515420 SLC30A2Q9BRI3 323 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 OR51V1Q9H2C8 321 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 SP140LQ9H930 580 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 KRT84Q9NSB2 600 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 NOP16Q9Y3C1 178 aaKnown RBP10.83□□□□□ -0.68
CLCN3-210ENST00000515420 WIPI2Q9Y4P8 454 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 JMJD1CQ15652 2540 aa10.83□□□□□ -0.68
CLCN3-210ENST00000515420 XRCC2O43543 280 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 TGFAP01135 160 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 IL2RGP31785 369 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 LMO4P61968 165 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 SNAPC1Q16533 368 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 OR2T2Q6IF00 324 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 ZFP1Q6P2D0 407 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 MRPL21Q7Z2W9 205 aaKnown RBP10.82□□□□□ -0.68
CLCN3-210ENST00000515420 PEG10Q86TG7 708 aaKnown RBP10.82□□□□□ -0.68
CLCN3-210ENST00000515420 NAA40Q86UY6 237 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 C10orf67Q8IYJ2 551 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 ZNF283Q8N7M2 679 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 CELF2-AS1Q8N7Q2 184 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 OTOSQ8NHW6 89 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 LRTOMTQ8WZ04 291 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 CCL17Q92583 94 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 SPSB4Q96A44 273 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 OTULINQ96BN8 352 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 RAB39BQ96DA2 213 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 SOX7Q9BT81 388 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 ABHD6Q9BV23 337 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 REPIN1Q9BWE0 567 aaKnown RBP10.82□□□□□ -0.68
CLCN3-210ENST00000515420 SLC22A4Q9H015 551 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 CENPMQ9NSP4 180 aa10.82□□□□□ -0.68
CLCN3-210ENST00000515420 ZAR1LA6NP61 321 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 LYNP07948 512 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 ANPEPP15144 967 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 HNF1AP20823 631 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 IGFBP5P24593 272 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 HSD11B1P28845 292 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 OPRL1P41146 370 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 SRP9P49458 86 aaKnown RBP10.81□□□□□ -0.68
CLCN3-210ENST00000515420 DVL1P1P54792 670 aaPredicted RBP10.81□□□□□ -0.68
CLCN3-210ENST00000515420 SNAI3Q3KNW1 292 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 KLHL12Q53G59 568 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 LCN1P1Q5VSP4 162 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 SLX4IPQ5VYV7 408 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 TMEM236Q5W0B7 351 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 AMIGO2Q86SJ2 522 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 OR5AS1Q8N127 324 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 ITLN1Q8WWA0 313 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 ZMYND19Q96E35 227 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms