RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 M0R082 166 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 WDR1O75083 606 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 OR5H8P0DN80 308 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 COX5AP20674 150 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 GUK1Q16774 197 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF468Q5VIY5 522 aaPredicted RBP12.09□□□□□ -0.47
TCOF1-214ENST00000515035 PLXDC2Q6UX71 529 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF574Q6ZN55 896 aaPredicted RBP12.09□□□□□ -0.47
TCOF1-214ENST00000515035 USP51Q70EK9 711 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 GRINAQ7Z429 371 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 PPP1R3BQ86XI6 285 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 LINC01465Q8N7H1 131 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 EXD3Q8N9H8 876 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 OR4D10Q8NGI6 311 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 GPX8Q8TED1 209 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 MAGT1Q9H0U3 335 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 RAB18Q9NP72 206 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 DYNLRB1Q9NP97 96 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 ASCC3Q8N3C0 2202 aaKnown RBP12.09□□□□□ -0.47
TCOF1-214ENST00000515035 AQP7P3A6NL99 342 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 DEGS1O15121 323 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 CT45A10P0DMU9 189 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 RPS27P42677 84 aaKnown RBP12.09□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF66Q6ZN08 573 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 ZFPM2Q8WW38 1151 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 EDAQ92838 391 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 EMC6Q9BV81 110 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 UCK1Q9HA47 277 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 HSBP1O75506 76 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 EDDM3AQ14507 147 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 SLC17A1Q14916 467 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 PCK2Q16822 640 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 ACOT6Q3I5F7 207 aaPredicted RBP12.09□□□□□ -0.47
TCOF1-214ENST00000515035 OR11L1Q8NGX0 322 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 ARRDC3Q96B67 414 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 SLAMF6Q96DU3 332 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 EIF1P41567 113 aaKnown RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 SLC16A13Q7RTY0 426 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 JAM3Q9BX67 310 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 AKR7A3O95154 331 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 KLKB1P03952 638 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 GUSBP08236 651 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 AVPR2P30518 371 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 PJVKQ0ZLH3 352 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 HLXQ14774 488 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 TOMM34Q15785 309 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 OR2W3Q7Z3T1 314 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 BHLHE23Q8NDY6 225 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 RTN4IP1Q8WWV3 396 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 SLC39A7Q92504 469 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 TBX21Q9UL17 535 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 KIAA0100Q14667 2235 aaKnown RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 MEIKINA0A087WXM9 373 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 G3V3Y1 287 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 HS3ST1O14792 307 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 FCMRO60667 390 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 LIM2P55344 173 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 SSBP1Q04837 148 aaKnown RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 VHLLQ6RSH7 139 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 C19orf53Q9UNZ5 99 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 IAPPP10997 89 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 ENPP1P22413 925 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 ACVR1Q04771 509 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 PRTGQ2VWP7 1150 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 ZNF429Q86V71 674 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 TMEM37Q8WXS4 190 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 USB1Q9BQ65 265 aaKnown RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 RBM38Q9H0Z9 239 aaKnown RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 ZNF385DQ9H6B1 395 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 SLC22A13Q9Y226 551 aa12.08□□□□□ -0.48
TCOF1-214ENST00000515035 YTHDF2Q9Y5A9 579 aaKnown RBP12.08□□□□□ -0.48
TCOF1-214ENST00000515035 AKAP11Q9UKA4 1901 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 IGLV3-10A0A075B6K4 115 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 TRAV1-2A0A0B4J238 106 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 MYOGP15173 224 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 TAS2R45P59539 299 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 PMP22Q01453 160 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 CLPPQ16740 277 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-214ENST00000515035 MIDNQ504T8 468 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 EMC4Q5J8M3 183 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 RPL7L1Q6DKI1 246 aaKnown RBP12.07□□□□□ -0.48
TCOF1-214ENST00000515035 RTN4RL1Q86UN2 441 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-214ENST00000515035 SLC35E1Q96K37 410 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 NRSN2Q9GZP1 204 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 MOB1AQ9H8S9 216 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 B3GAT1Q9P2W7 334 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 EIF4E2O60573 245 aaKnown RBP12.07□□□□□ -0.48
TCOF1-214ENST00000515035 CLEC3BP05452 202 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 RRASP10301 218 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 SLC25A4P12235 298 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 TCN2P20062 427 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 PIGPP57054 158 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 ADAMTSL4Q6UY14 1074 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 FAM24BQ8N5W8 94 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 ARIH2OSQ8N7S6 290 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 OR51F2Q8NH61 342 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 MUCL1Q96DR8 90 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms