RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 GGNBP1Q5YKI7 109 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 OR10K2Q6IF99 312 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 PTCRAQ6ISU1 281 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 PARGQ86W56 976 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 YAF2Q8IY57 180 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 SHISA5Q8N114 240 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 TSEN15Q8WW01 171 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 PRRC1Q96M27 445 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 OR7D2Q96RA2 312 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 FAIM2Q9BWQ8 316 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 POLR2J3Q9H1A7 115 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 TMEM74BQ9NUR3 256 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 PRUNE2Q8WUY3 3088 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 CLEC18AA5D8T8 446 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 H0Y8X5 98 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 K7ERU9 68 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 ZNF749O43361 778 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 RAMP3O60896 148 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 SCG5P05408 212 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 CST2P09228 141 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 GZMBP10144 247 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 LAMP2P13473 410 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 TNFRSF4P43489 277 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 C4orf48Q5BLP8 95 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 CLEC18BQ6UXF7 455 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 SLC35E3Q7Z769 313 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 TCEANCQ8N8B7 351 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 CLEC18CQ8NCF0 446 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 OR4S1Q8NGB4 309 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 OR4K5Q8NGD3 323 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 OR13C8Q8NGS7 320 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 OR13C5Q8NGS8 318 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 ARL11Q969Q4 196 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 WDR92Q96MX6 357 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 ARHGDIGQ99819 225 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 SELENOIQ9C0D9 397 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 SLITRK2Q9H156 845 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 ZMAT3Q9HA38 289 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 MEPEQ9NQ76 525 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 PGPEP1Q9NXJ5 209 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 SMPXQ9UHP9 88 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 YLPM1P49750 1951 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 C9orf172C9J069 976 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 THY1P04216 161 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 CXCR1P25024 350 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 AK4P27144 223 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 CLDN2P57739 230 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 RBPJQ06330 500 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 HYAL1Q12794 435 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 RAB31Q13636 194 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 SHHQ15465 462 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 ENTPD8Q5MY95 495 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 SLC25A30Q5SVS4 291 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 VRK2Q86Y07 508 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 KDM8Q8N371 416 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 CCL4L1Q8NHW4 92 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 ASB5Q8WWX0 329 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 FAM46BQ96A09 425 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 SPSB1Q96BD6 273 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 TRMT61BQ9BVS5 477 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 FNDC11Q9BVV2 318 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 OR2J1Q9GZK6 312 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 NGBQ9NPG2 151 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 UQCC1Q9NVA1 299 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 TVP23BQ9NYZ1 205 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 TESQ9UGI8 421 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 TBC1D3DA0A087WVF3 549 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 TBC1D3IA0A087WXS9 549 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 TBC1D3EA0A087X179 549 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 TBC1D3LB9A6J9 549 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 SLC31A1O15431 190 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 GNG7O60262 68 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 DFFBO76075 338 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 HTR2CP28335 458 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 PPIAP62937 165 aaKnown RBP6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 SNTB2Q13425 540 aaKnown RBP6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 SYT14P1Q58G82 188 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 TBC1D3CQ6IPX1 549 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 MRGPREQ86SM8 312 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 TBC1D3Q8IZP1 549 aaPredicted RBP6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 OR56A1Q8NGH5 318 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 OR10R2Q8NGX6 335 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 RHBDD1Q8TEB9 315 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 DIO2Q92813 273 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 TM4SF19Q96DZ7 209 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 SMIM8Q96KF7 97 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 NUDT9Q9BW91 350 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 TSSK6Q9BXA6 273 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 TMPRSS13Q9BYE2 586 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 VCX2Q9H322 139 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 PSG11Q9UQ72 335 aa6.71□□□□□ -1.33
PDLIM5-219ENST00000514743 LAMA1P25391 3075 aa6.71□□□□□ -1.34
PDLIM5-219ENST00000514743 A0A087WUU8 490 aa6.71□□□□□ -1.34
PDLIM5-219ENST00000514743 P2RX6O15547 441 aa6.71□□□□□ -1.34
PDLIM5-219ENST00000514743 TCRBP04435 133 aa6.71□□□□□ -1.34
PDLIM5-219ENST00000514743 ASGR2P07307 311 aa6.71□□□□□ -1.34
PDLIM5-219ENST00000514743 SMIM10L1P0DMW3 83 aa6.71□□□□□ -1.34
PDLIM5-219ENST00000514743 IL12BP29460 328 aa6.71□□□□□ -1.34
PDLIM5-219ENST00000514743 CMPK1P30085 196 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms