RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 SIGLEC14Q08ET2 396 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 IHHQ14623 411 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 NCMAPQ5T1S8 102 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 GRINAQ7Z429 371 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 ZNF610Q8N9Z0 462 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 OR1J1Q8NGS3 322 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 A4GNTQ9UNA3 340 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 TRBV23-1A0A0A0MS06 115 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 A8MXK9 166 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 SEMG1P04279 462 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 TGFBR3Q03167 851 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 GPNMBQ14956 572 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 OTPQ5XKR4 325 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 C6orf15Q6UXA7 325 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-213ENST00000514442 UBALD2Q8IYN6 164 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 PUSL1Q8N0Z8 303 aaKnown RBP11.9□□□□□ -0.5
TCOF1-213ENST00000514442 KIRREL1Q96J84 757 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 ZNF75AQ96N20 296 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 COA3Q9Y2R0 106 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-213ENST00000514442 FAM96BQ9Y3D0 163 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 ANKRD20A5PA0PJZ0 165 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 LMO7DNF2Z398 122 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 H0YIG0 161 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 PCBP4P57723 403 aaKnown RBP11.9□□□□□ -0.5
TCOF1-213ENST00000514442 CD300LDQ6UXZ3 194 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 YRDCQ86U90 279 aaKnown RBP11.9□□□□□ -0.5
TCOF1-213ENST00000514442 OR4N2Q8NGD1 307 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 OR4K15Q8NH41 348 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-213ENST00000514442 BCO1Q9HAY6 547 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 GSN-AS1Q9NRJ2 163 aa11.9□□□□□ -0.5
TCOF1-213ENST00000514442 TGOLN2O43493 480 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 PLPP2O43688 288 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 CTSVO60911 334 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 SLC2A1P11166 492 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 FGF7P21781 194 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 SNRPNP63162 240 aaKnown RBP11.9□□□□□ -0.51
TCOF1-213ENST00000514442 ACSM1Q08AH1 577 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 PPA1Q15181 289 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 CNN3Q15417 329 aaKnown RBP11.9□□□□□ -0.51
TCOF1-213ENST00000514442 PRSS41Q7RTY9 318 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 SYS1Q8N2H4 156 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 OR9K2Q8NGE7 335 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 CFHR5Q9BXR6 569 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 PRDM7Q9NQW5 492 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 CMC2Q9NRP2 79 aa11.9□□□□□ -0.51
TCOF1-213ENST00000514442 KCNE1BA0A087WTH5 132 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 MBTPS2O43462 519 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 NME2P1O60361 137 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 HPP00738 406 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 CCL7P80098 99 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 FZD2Q14332 565 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 HLA-BQ31612 363 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 LYG2Q86SG7 212 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 CRLF2Q9HC73 371 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 A0A1W2PNR3 127 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 K7EQS6 105 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 HIST1H1CP16403 213 aaKnown RBP11.89□□□□□ -0.51
TCOF1-213ENST00000514442 EXT1Q16394 746 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 ZNF239Q16600 458 aaKnown RBP11.89□□□□□ -0.51
TCOF1-213ENST00000514442 GUCA2BQ16661 112 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 SLC25A30Q5SVS4 291 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 OR2T2Q6IF00 324 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 Q7L0L9 218 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 ARGFXA6NJG6 315 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 DVL2O14641 736 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 EIF4E2O60573 245 aaKnown RBP11.89□□□□□ -0.51
TCOF1-213ENST00000514442 PPICP45877 212 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 CAV2P51636 162 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 SSBP1Q04837 148 aaKnown RBP11.89□□□□□ -0.51
TCOF1-213ENST00000514442 DCXRQ7Z4W1 244 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 FER1L6-AS2Q96M78 137 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 IER2Q9BTL4 223 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 KCNMB2Q9Y691 235 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 JTBO76095 146 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 DVL1P1P54792 670 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-213ENST00000514442 PCBD1P61457 104 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 PPP1CAP62136 330 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 AGERQ15109 404 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 GPR157Q5UAW9 335 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 LRRC3BQ96PB8 259 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 ADAT1Q9BUB4 502 aaKnown RBP11.89□□□□□ -0.51
TCOF1-213ENST00000514442 HINT2Q9BX68 163 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 PARP12Q9H0J9 701 aaKnown RBP11.89□□□□□ -0.51
TCOF1-213ENST00000514442 KCND3Q9UK17 655 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 PCDHGA1Q9Y5H4 931 aa11.89□□□□□ -0.51
TCOF1-213ENST00000514442 PLSCR5A0PG75 271 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 GLCEO94923 617 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 APEHP13798 732 aaKnown RBP11.88□□□□□ -0.51
TCOF1-213ENST00000514442 H1FNTQ75WM6 255 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-213ENST00000514442 C1orf123Q9NWV4 160 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 DNASE2O00115 360 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-213ENST00000514442 XRCC3O43542 346 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 LILRB5O75023 590 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 MOSPD3O75425 235 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 ZGLP1P0C6A0 271 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 FCGR2AP12318 317 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 IL9P15248 144 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 EPHA1P21709 976 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 EIF1P41567 113 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms