RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	SSX6	Q7RTT6	188 aa		13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ZNF101	Q8IZC7	436 aa		13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	FBXL14	Q8N1E6	418 aa		13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	C4orf36	Q96KX1	117 aa		13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	RHNO1	Q9BSD3	238 aa		13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	CCDC90B	Q9GZT6	254 aa		13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	OR10A2	Q9H208	303 aa		13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	UBTD1	Q9HAC8	227 aa		13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	FKBP14	Q9NWM8	211 aa		13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	UBAP1	Q9NZ09	502 aa		13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MRM2	Q9UI43	246 aa	Known RBP	13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	CAB39	Q9Y376	341 aa	Predicted RBP	13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495		R4GMQ9	66 aa		13.58	□□□□□ -0.24
SH3TC1-223	ENST00000513495	COL12A1	Q99715	3063 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	RPP14	O95059	124 aa	Known RBP	13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ATE1	O95260	518 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PLAU	P00749	431 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	BMP4	P12644	408 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	CFL1	P23528	166 aa	Known RBP	13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	THBS4	P35443	961 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MMP16	P51512	607 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SLC35A2	P78381	396 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MOG	Q16653	247 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	TIGD6	Q17RP2	521 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	BCL2L15	Q5TBC7	163 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	C20orf204	Q6ZNR8	217 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	RFPL4B	Q6ZWI9	263 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ZNF295-AS1	Q8N0V1	137 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	RGCC	Q9H4X1	137 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	DUSP21	Q9H596	190 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	OPA3	Q9H6K4	179 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	GPR160	Q9UJ42	338 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	FBXO9	Q9UK97	447 aa	Predicted RBP	13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PCDHGB5	Q9Y5G0	923 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SNX5	Q9Y5X3	404 aa		13.57	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ABCA4	P78363	2273 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495		E7EQL1	145 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MAGEB4	O15481	346 aa	Predicted RBP	13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MRPS14	O60783	128 aa	Known RBP	13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	NGF	P01138	241 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	HTR1A	P08908	422 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	LIMS3	P0CW19	117 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	LIMS4	P0CW20	117 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SLC2A1	P11166	492 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SERPINF1	P36955	418 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ETV1	P50549	477 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	OR12D2	P58182	307 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ZNF684	Q5T5D7	378 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	AGAP6	Q5VW22	663 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	LIPN	Q5VXI9	398 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	COLCA1	Q6ZS62	124 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MRPL21	Q7Z2W9	205 aa	Known RBP	13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ZNF611	Q8N823	705 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	OR52N1	Q8NH53	320 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SYNPR	Q8TBG9	265 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MND1	Q9BWT6	205 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	CDCA4	Q9BXL8	241 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PLK3	Q9H4B4	646 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ACOXL	Q9NUZ1	547 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PTTG3P	Q9NZH4	202 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ZNF391	Q9UJN7	358 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ADGRG4	Q8IZF6	3080 aa		13.56	□□□□□ -0.24
SH3TC1-223	ENST00000513495	UTP20	O75691	2785 aa	Known RBP	13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495		A0A1W2PPW3	197 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	TMEM129	A0AVI4	362 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PRR32	B1ATL7	298 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	GPRIN2	O60269	458 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	RPSA	P08865	295 aa	Known RBP	13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	OR4A8	P0C604	315 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SELE	P16581	610 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	C21orf33	P30042	268 aa	Predicted RBP	13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	KLF3	P57682	345 aa	Predicted RBP	13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SPATA46	Q5T0L3	261 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	RNLS	Q5VYX0	342 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	HIST2H2BC	Q6DN03	193 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PRSS48	Q7RTY5	328 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	NAA40	Q86UY6	237 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	COMMD2	Q86X83	199 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MUC15	Q8N387	334 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SVOP	Q8N4V2	548 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SLC25A40	Q8TBP6	338 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	TMEM171	Q8WVE6	324 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	NEUROG1	Q92886	237 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MRPL24	Q96A35	216 aa	Known RBP	13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	OR2J1	Q9GZK6	312 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PBOV1	Q9GZY1	135 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	TRIM36	Q9NQ86	728 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	FAM206A	Q9NX38	181 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ERVK-18	Q9QC07	812 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	DUSP13	Q9UII6	198 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	OR52A1	Q9UKL2	312 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	STARD10	Q9Y365	291 aa		13.55	□□□□□ -0.24
SH3TC1-223	ENST00000513495	RTTN	Q86VV8	2226 aa		13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495		B9A039	149 aa		13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	TNFAIP8	O95379	198 aa		13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	RAC2	P15153	192 aa		13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	TTK	P33981	857 aa		13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	CHN2	P52757	468 aa		13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	WNT4	P56705	351 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms