RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 MTNR1AP48039 350 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 SRP9P49458 86 aaKnown RBP6.03□□□□□ -1.44
USP46-208ENST00000512656 RPS6KA3P51812 740 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 LIPEQ05469 1076 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 BAMBIQ13145 260 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 KRR1Q13601 381 aaKnown RBP6.03□□□□□ -1.44
USP46-208ENST00000512656 MESTQ5EB52 335 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 DNM1P34Q6PK57 102 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 BTNL3Q6UXE8 466 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 LRRN1Q6UXK5 716 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 FBXW12Q6X9E4 464 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 Q6ZR03 302 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 FAM122BQ7Z309 247 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 VTCN1Q7Z7D3 282 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 SLC15A3Q8IY34 581 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 C1orf87Q8N0U7 546 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 ATG16L2Q8NAA4 619 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 GJC3Q8NFK1 279 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 FAM162AQ96A26 154 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 APOBEC3DQ96AK3 386 aaPredicted RBP6.03□□□□□ -1.44
USP46-208ENST00000512656 RCN3Q96D15 328 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 CCDC140Q96MF4 163 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 ZNF582Q96NG8 517 aaPredicted RBP6.03□□□□□ -1.44
USP46-208ENST00000512656 OR2V2Q96R30 315 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 MS4A7Q9GZW8 240 aaPredicted RBP6.03□□□□□ -1.44
USP46-208ENST00000512656 SYT4Q9H2B2 425 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 RERGLQ9H628 205 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 EFCAB1Q9HAE3 211 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 NMNAT1Q9HAN9 279 aaPredicted RBP6.03□□□□□ -1.44
USP46-208ENST00000512656 MMP26Q9NRE1 261 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 FGFR1OP2Q9NVK5 253 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 CMTM6Q9NX76 183 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 VSX1Q9NZR4 365 aaPredicted RBP6.03□□□□□ -1.44
USP46-208ENST00000512656 ASH2LQ9UBL3 628 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 RPS6KA6Q9UK32 745 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 AURKCQ9UQB9 309 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 ADAM18Q9Y3Q7 739 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 SNX13Q9Y5W8 968 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 ENPP4Q9Y6X5 453 aa6.03□□□□□ -1.44
USP46-208ENST00000512656 TRRAPQ9Y4A5 3859 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 VWFP04275 2813 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 A0A1W2PRQ8 180 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 DNAJC9-AS1A6NH13 148 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 CEACAM18A8MTB9 384 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 C22orf46C9J442 243 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 CLDN34H7C241 214 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 CDC42EP2O14613 210 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 CCDC22O60826 627 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 PTP4A3O75365 173 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 FSTL3O95633 263 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 SERPINA1P01009 418 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 SCG5P05408 212 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 H1F0P07305 194 aaKnown RBP6.02□□□□□ -1.45
USP46-208ENST00000512656 WNT2P09544 360 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 COX4I1P13073 169 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 IRF2P14316 349 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 RPS2P15880 293 aaKnown RBP6.02□□□□□ -1.45
USP46-208ENST00000512656 RHCEP18577 417 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 CENPAP49450 140 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 SLC7A2P52569 658 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 SMIM11AP58511 58 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 GNB2P62879 340 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 RPL11P62913 178 aaKnown RBP6.02□□□□□ -1.45
USP46-208ENST00000512656 IL13RA1P78552 427 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 PAX8Q06710 450 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 ECH1Q13011 328 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 DGCR6Q14129 220 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 KRT72Q14CN4 511 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 SLC36A3Q495N2 470 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 SPRNQ5BIV9 151 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 FGD3Q5JSP0 725 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 OR2T2Q6IF00 324 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 TBPL2Q6SJ96 375 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 DPY19L2P2Q6ZN68 376 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 OR5AS1Q8N127 324 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 OR8G5Q8NG78 346 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 OR8B3Q8NGG8 313 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 OR52E2Q8NGJ4 325 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 SLC7A13Q8TCU3 470 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 SLC7A6Q92536 515 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 NEIL1Q96FI4 390 aaPredicted RBP6.02□□□□□ -1.45
USP46-208ENST00000512656 OR8B2Q96RD0 313 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 SIGLEC11Q96RL6 698 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 GPX7Q96SL4 187 aaPredicted RBP6.02□□□□□ -1.45
USP46-208ENST00000512656 COQ7Q99807 217 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 KCTD14Q9BQ13 255 aaPredicted RBP6.02□□□□□ -1.45
USP46-208ENST00000512656 SSBP3Q9BWW4 388 aaPredicted RBP6.02□□□□□ -1.45
USP46-208ENST00000512656 HCAR1Q9BXC0 346 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 HDHD2Q9H0R4 259 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 POFUT1Q9H488 388 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 ZNF696Q9H7X3 374 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 NRIP3Q9NQ35 241 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 DCAF16Q9NXF7 216 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 PTTG3PQ9NZH4 202 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 KIF17Q9P2E2 1029 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 ZNF69Q9UC07 566 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 SIGLEC7Q9Y286 467 aa6.02□□□□□ -1.45
USP46-208ENST00000512656 COA3Q9Y2R0 106 aaPredicted RBP6.02□□□□□ -1.45
USP46-208ENST00000512656 NOP16Q9Y3C1 178 aaKnown RBP6.02□□□□□ -1.45
USP46-208ENST00000512656 PCDHGB1Q9Y5G3 927 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms