RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 LRRC29Q8WV35 223 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 ISL2Q96A47 359 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 ELP4Q96EB1 424 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 OR52D1Q9H346 318 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 HRH4Q9H3N8 390 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 LIPGQ9Y5X9 500 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 LOC102723996A0A087X1L8 192 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 ZNF195O14628 629 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 PPP1R11O60927 126 aaPredicted RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 DSCR4P56555 118 aaPredicted RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 PRDX1Q06830 199 aaKnown RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 FDX2Q6P4F2 183 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 FAHD1Q6P587 224 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 TTC9BQ8N6N2 239 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 EID2BQ96D98 161 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 PLPPR2Q96GM1 343 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 RANBP9Q96S59 729 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 YTHDF1Q9BYJ9 559 aaKnown RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 OCIAD1Q9NX40 245 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 FKBP11Q9NYL4 201 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 A0A1W2PPC4 97 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 MT-ATP6P00846 226 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 PMP2P02689 132 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 LAMP1P11279 417 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 EVI2BP34910 448 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 MRPS10P82664 201 aaKnown RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 JMJD6Q6NYC1 403 aaPredicted RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 WDR73Q6P4I2 378 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 GLIPR1L1Q6UWM5 242 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 CLEC9AQ6UXN8 241 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 TBC1D26Q86UD7 250 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 MUC20Q8N307 709 aaPredicted RBP8.11□□□□□ -1.11
VCAN-208ENST00000512590 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
VCAN-208ENST00000512590 VSIG10L2P0DP72 767 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 RPS10P46783 165 aaKnown RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 C18orf21Q32NC0 220 aaPredicted RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 ADAMTSL4Q6UY14 1074 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 GTF2H5Q6ZYL4 71 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 IGDCC3Q8IVU1 814 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 OR5A2Q8NGI9 324 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 RHOXF1Q8NHV9 184 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 SLC25A40Q8TBP6 338 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 SCARB1Q8WTV0 552 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 PDXPQ96GD0 296 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 PKMYT1Q99640 499 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 JAM3Q9BX67 310 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 ACTR3CQ9C0K3 210 aaPredicted RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 PARP11Q9NR21 331 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 MARCH5Q9NX47 278 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 A0A1W2PS18 150 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 A8MV72 311 aaPredicted RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 ARPC5O15511 151 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 C1SP09871 688 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 B4GALT1P15291 398 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 ILKQ13418 452 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 NSUN5P1Q3KNT7 163 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 OR10K1Q8NGX5 313 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 MED30Q96HR3 178 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 OXGR1Q96P68 337 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 OR8B4Q96RC9 309 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 C11orf54Q9H0W9 315 aaPredicted RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 DNAJB12Q9NXW2 375 aaKnown RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 COLQQ9Y215 455 aaPredicted RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 MRPS16Q9Y3D3 137 aaKnown RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 WNT9BO14905 357 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 PRLHRP49683 370 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 CLDN8P56748 225 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 FAM106AQ4KMX7 169 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 GUSBP11Q6P575 273 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 NUFIP2Q7Z417 695 aaKnown RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 CALHM3Q86XJ0 350 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 SLC30A7Q8NEW0 376 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 Q8WTZ3 238 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 EMC6Q9BV81 110 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 FUNDC2Q9BWH2 189 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 FAM212BQ9NTI7 297 aaPredicted RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 OR1A1Q9P1Q5 309 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 ZNF281Q9Y2X9 895 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 H0Y8X5 98 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 ACP1P24666 158 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 EMP1P54849 157 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 CNPY1Q3B7I2 92 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 C9orf50Q5SZB4 431 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 VWA1Q6PCB0 445 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 GPRIN1Q7Z2K8 1008 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 PACRGLQ8N7B6 248 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 BTNL2Q9UIR0 455 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 UGT2A1Q9Y4X1 527 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 METTL12A8MUP2 240 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 FAM106CPP0CH98 169 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 RGNQ15493 299 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 D2HGDHQ8N465 521 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 AGAP11Q8TF27 550 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 SEPSECSQ9HD40 501 aaKnown RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 TAS2R5Q9NYW4 299 aa8.1□□□□□ -1.11
VCAN-208ENST00000512590 COA3Q9Y2R0 106 aaPredicted RBP8.1□□□□□ -1.11
VCAN-208ENST00000512590 FAM24AA6NFZ4 105 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 M0QYG6 137 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 GPX5O75715 221 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms