RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	IL1B	P01584	269 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	CALM1	P0DP23	149 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	CALM2	P0DP24	149 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	CALM3	P0DP25	149 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	PNMT	P11086	282 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	ZNF44	P15621	663 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	CD1C	P29017	333 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	SLC26A3	P40879	764 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	RPS15	P62841	145 aa	Known RBP	3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	ACTG1	P63261	375 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	ASPH	Q12797	758 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	IHH	Q14623	411 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	C6orf52	Q5T4I8	152 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	C9orf64	Q5T6V5	341 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	ZNF621	Q6ZSS3	439 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	PGAP1	Q75T13	922 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	HORMAD1	Q86X24	394 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	GKN2	Q86XP6	184 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	ZDHHC21	Q8IVQ6	265 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	H1FOO	Q8IZA3	346 aa	Predicted RBP	3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	OR4D5	Q8NGN0	318 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	TIMD4	Q96H15	378 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	CNDP1	Q96KN2	507 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	MRPL45	Q9BRJ2	306 aa	Known RBP	3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	KRTAP4-3	Q9BYR4	195 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	RNF167	Q9H6Y7	350 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	CCL28	Q9NRJ3	127 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	SLC35D1	Q9NTN3	355 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	RNF14	Q9UBS8	474 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	ZNF835	Q9Y2P0	537 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	SLC25A15	Q9Y619	301 aa		3.38	□□□□□ -1.87
LINC01088-208	ENST00000511895	DNAH7	Q8WXX0	4024 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	LCE6A	A0A183	80 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895		A0A1B0GWJ7	208 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	AP2A1	O95782	977 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	IGHG4	P01861	327 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	UGT2B4	P06133	528 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	RBMY1A1	P0DJD3	496 aa	Known RBP	3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	NPR2	P20594	1047 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	MAP3K8	P41279	467 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	SNTB2	Q13425	540 aa	Known RBP	3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	PDK4	Q16654	411 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	FILIP1L	Q4L180	1135 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	LRRC10	Q5BKY1	277 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	OR2G6	Q5TZ20	316 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	OR52E8	Q6IFG1	317 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	LRRC31	Q6UY01	552 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	OTUD6A	Q7L8S5	288 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	NPB	Q8NG41	125 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	EFHD2	Q96C19	240 aa	Predicted RBP	3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	FOPNL	Q96NB1	174 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	PKMYT1	Q99640	499 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	RAB34	Q9BZG1	259 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	RIBC2	Q9H4K1	309 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	REEP4	Q9H6H4	257 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	QPCTL	Q9NXS2	382 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	KCNIP1	Q9NZI2	227 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	GNPTG	Q9UJJ9	305 aa		3.37	□□□□□ -1.87
LINC01088-208	ENST00000511895	DMBT1	Q9UGM3	2413 aa	Predicted RBP	3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	MED12	Q93074	2177 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	MUC4	Q99102	2169 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	PCM1	Q15154	2024 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	PLCE1	Q9P212	2302 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	DLGAP1	O14490	977 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	XPO1	O14980	1071 aa	Known RBP	3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	POLR2D	O15514	142 aa	Known RBP	3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	CTSE	P14091	401 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	RPA2	P15927	270 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	PEX19	P40855	299 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	NMU	P48645	174 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	CBX1	P83916	185 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	FRMPD2B	Q6IN97	320 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	CAMK2N1	Q7Z7J9	78 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	SAXO1	Q8IYX7	474 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	DTX3L	Q8TDB6	740 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	THRSP	Q92748	146 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	TGM7	Q96PF1	710 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	ACBD6	Q9BR61	282 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	LIN28A	Q9H9Z2	209 aa	Known RBP	3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	THUMPD1	Q9NXG2	353 aa	Known RBP	3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	RBAK	Q9NYW8	714 aa	Predicted RBP	3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	FARSA	Q9Y285	508 aa	Known RBP	3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	HEBP2	Q9Y5Z4	205 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	DSCAM	O60469	2012 aa		3.36	□□□□□ -1.87
LINC01088-208	ENST00000511895	NUP210L	Q5VU65	1888 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	LOC110117498-PIK3R3	F6TDL0	507 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	RAD51B	O15315	384 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	TBX19	O60806	448 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	SPAG7	O75391	227 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	ATP5L	O75964	103 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	WISP3	O95389	354 aa	Predicted RBP	3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	HSMCR30	P0CW71	290 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	HPGD	P15428	266 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	PPT1	P50897	306 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	ZBTB6	Q15916	424 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	RFX4	Q33E94	735 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	TTC23	Q5W5X9	447 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	TMEM225	Q6GV28	225 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	TMEM123	Q8N131	208 aa		3.35	□□□□□ -1.87
LINC01088-208	ENST00000511895	STK40	Q8N2I9	435 aa		3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms