RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 FAM71F1Q96KD3 344 aaPredicted RBP4.82□□□□□ -1.64
USP53-206ENST00000510737 SERPINI1Q99574 410 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 RBBP8Q99708 897 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 GAL3ST1Q99999 423 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 LMF2Q9BU23 707 aaKnown RBP4.82□□□□□ -1.64
USP53-206ENST00000510737 DERL2Q9GZP9 239 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 NAT10Q9H0A0 1025 aaKnown RBP4.82□□□□□ -1.64
USP53-206ENST00000510737 PFDN4Q9NQP4 134 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 UBAP1Q9NZ09 502 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 IFNKQ9P0W0 207 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 DAPK2Q9UIK4 370 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 FZR1Q9UM11 496 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 POMT1Q9Y6A1 747 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 SESN1Q9Y6P5 492 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 HERC1Q15751 4861 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 TRAV40A0A0B4J280 105 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 IGHV1-69-2A0A0G2JMI3 117 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 MYO1GB0I1T2 1018 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 CLDN25C9JDP6 229 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 MGRN1O60291 552 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 NUDT14O95848 222 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 AGR2O95994 175 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 ALOX5P09917 674 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 PPIAL4GP0DN37 164 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 ZNF35P13682 527 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 SLC6A6P31641 620 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 GLRXP35754 106 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 MAP3K8P41279 467 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 H3F3AP84243 136 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 PAX2Q02962 417 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 LCP2Q13094 533 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 SELENBP1Q13228 472 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 NDUFAF6Q330K2 333 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 TMEM95Q3KNT9 176 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 ADAMTSL5Q6ZMM2 481 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 PEX26Q7Z412 305 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 COMMD6Q7Z4G1 85 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 COMMD2Q86X83 199 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 MISPQ8IVT2 679 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 ABHD12Q8N2K0 398 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 UBL4BQ8N7F7 174 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 NPEPL1Q8NDH3 523 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 OR11H4Q8NGC9 324 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 MAGEE2Q8TD90 523 aaPredicted RBP4.81□□□□□ -1.64
USP53-206ENST00000510737 AURKBQ96GD4 344 aaPredicted RBP4.81□□□□□ -1.64
USP53-206ENST00000510737 CRLF2Q9HC73 371 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 PPANQ9NQ55 473 aaKnown RBP4.81□□□□□ -1.64
USP53-206ENST00000510737 UBQLN4Q9NRR5 601 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 AHSPQ9NZD4 102 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 OPTCQ9UBM4 332 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 FOXJ3Q9UPW0 622 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 FLVCR1Q9Y5Y0 555 aa4.81□□□□□ -1.64
USP53-206ENST00000510737 TET2Q6N021 2002 aaPredicted RBP4.8□□□□□ -1.64
USP53-206ENST00000510737 A0A1W2PQD3 144 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 BANF1O75531 89 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 KCNK2O95069 426 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 PGAM1P18669 254 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 MPIP34949 423 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 MAGEA8P43361 318 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 P2RX1P51575 399 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 KRTAP10-1P60331 282 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 QPRTQ15274 297 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 ATP6AP1LQ52LC2 224 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 FAM219BQ5XKK7 198 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 TMEM107Q6UX40 140 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 PAGE2Q7Z2X7 111 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 KRT77Q7Z794 578 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 C1orf174Q8IYL3 243 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 OR2L13Q8N349 312 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 OR6S1Q8NH40 331 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 PIGXQ8TBF5 258 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 GPR151Q8TDV0 419 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 GATAD1Q8WUU5 269 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 CCL17Q92583 94 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 EXT2Q93063 718 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 MOAP1Q96BY2 351 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 CERS2Q96G23 380 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 TIMD4Q96H15 378 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 TSPAN32Q96QS1 320 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 FAIM2Q9BWQ8 316 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 CAB39LQ9H9S4 337 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 C3orf14Q9HBI5 128 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 TMEM165Q9HC07 324 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 XAB2Q9HCS7 855 aaKnown RBP4.8□□□□□ -1.64
USP53-206ENST00000510737 SLC35C2Q9NQQ7 365 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 B3GAT1Q9P2W7 334 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 RNF14Q9UBS8 474 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 ACOT9Q9Y305 439 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 SIGLEC9Q9Y336 463 aa4.8□□□□□ -1.64
USP53-206ENST00000510737 ISPDA4D126 451 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 MIF4GDA9UHW6 222 aaKnown RBP4.79□□□□□ -1.64
USP53-206ENST00000510737 UBXN8O00124 270 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 XRCC3O43542 346 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 HPRP00739 348 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 IL3P08700 152 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 SBK2P0C263 348 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 MMP9P14780 707 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 HPGDP15428 266 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms