RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 OR7A17O14581 309 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 GOSR2O14653 212 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 VAMP5O95183 116 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 LDOC1O95751 146 aaPredicted RBP2.96□□□□□ -1.94
NUP54-209ENST00000510569 GSTT2P0CG29 244 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 GSTT2BP0CG30 244 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 RD3LP0DJH9 198 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 GIMD1P0DJR0 217 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 HSPD1P10809 573 aaKnown RBP2.96□□□□□ -1.94
NUP54-209ENST00000510569 PSG2P11465 335 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 PMCHP20382 165 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 KITLGP21583 273 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 HTR2CP28335 458 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 OR1E1P30953 314 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 MAGEA6P43360 314 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 OR1D4P47884 311 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 CDK9P50750 372 aaKnown RBP2.96□□□□□ -1.94
NUP54-209ENST00000510569 NOVA1P51513 510 aaKnown RBP2.96□□□□□ -1.94
NUP54-209ENST00000510569 NKX2-5P52952 324 aaPredicted RBP2.96□□□□□ -1.94
NUP54-209ENST00000510569 CCL7P80098 99 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 KLRC3Q07444 240 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 C2orf54Q08AI8 447 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 MGAT3Q09327 533 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 BNIP2Q12982 314 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 PDIA2Q13087 525 aaKnown RBP2.96□□□□□ -1.94
NUP54-209ENST00000510569 DPYSL3Q14195 570 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 OR4D1Q15615 310 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 ZBTB6Q15916 424 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 TNXAQ16473 311 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 METTL21CQ5VZV1 264 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 C22orf42Q6IC83 251 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 REEP3Q6NUK4 255 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 UQCC3Q6UW78 93 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 CWC27Q6UX04 472 aaKnown RBP2.96□□□□□ -1.94
NUP54-209ENST00000510569 TFAP2EQ6VUC0 442 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 PGAP1Q75T13 922 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 ERICH1Q86X53 443 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 CYP4Z2PQ8N1L4 340 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 KIF2BQ8N4N8 673 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 TMEM156Q8N614 296 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 SDR9C7Q8NEX9 313 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 STXBP6Q8NFX7 210 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 OR5B17Q8NGF7 314 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 OR8K1Q8NGG5 319 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 OR2D3Q8NGH3 330 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 OR6N2Q8NGY6 317 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 OR6X1Q8NH79 312 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 NANPQ8TBE9 248 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 ACTL9Q8TC94 416 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 TCP10LQ8TDR4 215 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 DNAJB3Q8WWF6 145 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 C22orf15Q8WYQ4 148 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 RMND5BQ96G75 393 aaPredicted RBP2.96□□□□□ -1.94
NUP54-209ENST00000510569 CXorf58Q96LI9 332 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 C12orf42Q96LP6 360 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 UTP23Q9BRU9 249 aaKnown RBP2.96□□□□□ -1.94
NUP54-209ENST00000510569 GPR174Q9BXC1 333 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 C1orf198Q9H425 327 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 ANKRD19PQ9H560 264 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 UGT1A10Q9HAW8 530 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 ANKHQ9HCJ1 492 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 ASCL3Q9NQ33 180 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 GPATCH2LQ9NWQ4 482 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 RHBDL2Q9NX52 303 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 CYB5R1Q9UHQ9 305 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 ERVW-1Q9UQF0 538 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 GINS2Q9Y248 185 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 MEMO1Q9Y316 297 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 ZNF337Q9Y3M9 751 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 TIMM10BQ9Y5J6 103 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 PEX16Q9Y5Y5 336 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 CDH10Q9Y6N8 788 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 SLIT2O94813 1529 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 RFX7Q2KHR2 1363 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 MED23Q9ULK4 1368 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 BCL9LQ86UU0 1499 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 SLC5A10A0PJK1 596 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 PRSS37A4D1T9 235 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 LRRC30A6NM36 301 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 CENPXA8MT69 81 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 C2orf74A8MZ97 194 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 G3V3Y1 287 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 M0R036 132 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 MAGEB4O15481 346 aaPredicted RBP2.95□□□□□ -1.94
NUP54-209ENST00000510569 ATP8B1O43520 1251 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 NDUFA2O43678 99 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 PRKAB2O43741 272 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 CHST1O43916 411 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 AIREO43918 545 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 CA11O75493 328 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 HSBP1O75506 76 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 FCN3O75636 299 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 STK17BO94768 372 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 FARS2O95363 451 aaKnown RBP2.95□□□□□ -1.94
NUP54-209ENST00000510569 PSMG1O95456 288 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 IFNA5P01569 189 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 ALDOBP05062 364 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 SLC35G4P0C7Q5 338 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 PET100P0DJ07 73 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 CD36P16671 472 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms