RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 SAR1BQ9Y6B6 198 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 SGCEO43556 437 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 NDUFB3O43676 98 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 KRT75O95678 551 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 ASAH2BP0C7U1 165 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 CPA3P15088 417 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 MSR1P21757 451 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 BGNP21810 368 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 GCAP28676 217 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 PRKAR1BP31321 381 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 GUCA1AP43080 201 aaPredicted RBP8.59□□□□□ -1.03
SNF8-207ENST00000509995 GSK3BP49841 420 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 UGT2B15P54855 530 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 PRSS12P56730 875 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 RPL23AP62750 156 aaKnown RBP8.59□□□□□ -1.03
SNF8-207ENST00000509995 SCRN3Q0VDG4 424 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 CCDC153Q494R4 210 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 ARMC4Q5T2S8 1044 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 HHATQ5VTY9 493 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 ZNF621Q6ZSS3 439 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 NANOGNBQ7Z5D8 188 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 DYNAPQ8N1N2 210 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 PLPP7Q8NBV4 271 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 ACOT11Q8WXI4 607 aaPredicted RBP8.59□□□□□ -1.03
SNF8-207ENST00000509995 WDR76Q9H967 626 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 TMEM27Q9HBJ8 222 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 ABCB10Q9NRK6 738 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.59□□□□□ -1.03
SNF8-207ENST00000509995 STX18Q9P2W9 335 aaKnown RBP8.59□□□□□ -1.03
SNF8-207ENST00000509995 HERC1Q15751 4861 aa8.59□□□□□ -1.03
SNF8-207ENST00000509995 A0A1W2PPL8 197 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 A0A1W2PQ09 198 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 E9PBE3 544 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 BLOC1S5-TXNDC5H3BN57 136 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 FMO6PO60774 539 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 LY86O95711 162 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 SLC6A1P30531 599 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 SERPINB5P36952 375 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 RPL18Q07020 188 aaKnown RBP8.58□□□□□ -1.04
SNF8-207ENST00000509995 SELPLGQ14242 412 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 MICBQ29980 383 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 LRRC10Q5BKY1 277 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 ZNF826PQ6ZT77 177 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 C18orf65Q6ZTR6 163 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 PIGWQ7Z7B1 504 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 C10orf107Q8IVU9 208 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 CCDC63Q8NA47 563 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 SPATA4Q8NEY3 305 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 APOBEC3DQ96AK3 386 aaPredicted RBP8.58□□□□□ -1.04
SNF8-207ENST00000509995 C1orf123Q9NWV4 160 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 SCOCQ9UIL1 159 aa8.58□□□□□ -1.04
SNF8-207ENST00000509995 A0A087WUV0 522 aaPredicted RBP8.57□□□□□ -1.04
SNF8-207ENST00000509995 hCG_1807616A0A1W2PRN6 198 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 TMEM247A6NEH6 219 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 OR6C6A6NF89 314 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 H0YAE9 185 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 ACOT8O14734 319 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 TPST2O60704 377 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 HIST1H2ABP04908 130 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 DBHP09172 617 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 UMPSP11172 480 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 SELLP14151 372 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 MUC1P15941 1255 aaPredicted RBP8.57□□□□□ -1.04
SNF8-207ENST00000509995 S100A3P33764 101 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 LGALS4P56470 323 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 RAB25P57735 213 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 RGS8P57771 180 aaPredicted RBP8.57□□□□□ -1.04
SNF8-207ENST00000509995 OR8G1Q15617 311 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 PCK2Q16822 640 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 LINC00114Q6XXX2 140 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 HIST3H2AQ7L7L0 130 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 OR2W3Q7Z3T1 314 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 LHFPL4Q7Z7J7 247 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 HIST1H2ACQ93077 130 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 DUS3LQ96G46 650 aaKnown RBP8.57□□□□□ -1.04
SNF8-207ENST00000509995 WACQ9BTA9 647 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 HCAR1Q9BXC0 346 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 BCL2L10Q9HD36 194 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 EMC7Q9NPA0 242 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 POLE4Q9NR33 117 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 AURKCQ9UQB9 309 aa8.57□□□□□ -1.04
SNF8-207ENST00000509995 FAM90A8PA6NJQ4 464 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 A6NLC8 198 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 NUDT19A8MXV4 375 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 SEC14L6B5MCN3 397 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 KPNA4O00629 521 aaPredicted RBP8.56□□□□□ -1.04
SNF8-207ENST00000509995 CHP2O43745 196 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 GLCEO94923 617 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 LY6G6CO95867 125 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 SCG5P05408 212 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 HCKP08631 526 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 TGM4P49221 684 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 CEBPDP49716 269 aaPredicted RBP8.56□□□□□ -1.04
SNF8-207ENST00000509995 CLNS1AP54105 237 aaKnown RBP8.56□□□□□ -1.04
SNF8-207ENST00000509995 PCLAFQ15004 111 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 CNPY4Q8N129 248 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 KLHL30-AS1Q8NEE0 82 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 BBS10Q8TAM1 723 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 MZB1Q8WU39 189 aa8.56□□□□□ -1.04
SNF8-207ENST00000509995 FOXRED1Q96CU9 486 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms