RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 TMEM225Q6GV28 225 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 OR4F3Q6IEY1 312 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TMEM71Q6P5X7 295 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TMPRSS9Q7Z410 1059 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MRGPRGQ86SM5 289 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TGIF2LYQ8IUE0 185 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MKXQ8IYA7 352 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MFSD4AQ8N468 514 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TMEM156Q8N614 296 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ACOT4Q8N9L9 421 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ISG20Q96AZ6 181 aaKnown RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 DDIT4LQ96D03 193 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 WDR89Q96FK6 387 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 MRAP2Q96G30 205 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TBX15Q96SF7 602 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ELOVL3Q9HB03 270 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 CLCF1Q9UBD9 225 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 OR5V1Q9UGF6 321 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 GPR34Q9UPC5 381 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 VDAC3Q9Y277 283 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 YIPF1Q9Y548 306 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ASB1Q9Y576 335 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TIMM22Q9Y584 194 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ZFP37Q9Y6Q3 630 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 TRAV30A0A087WSZ9 112 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TBC1D3EA0A087X179 549 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 A0A1W2PR80 420 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 POM121CA8CG34 1229 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ANKRD63C9JTQ0 380 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 FCN1O00602 326 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 PRICKLE3O43900 615 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 DDAH2O95865 285 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 EPHX1P07099 455 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 HNRNPA1P09651 372 aaKnown RBP eCLIP3.27□□□□□ -1.89
USP53-205ENST00000509769 FPR2P25090 351 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 FGF9P31371 208 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 GABRA3P34903 492 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 OPRD1P41143 372 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 KIR2DS2P43631 304 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 AGTR2P50052 363 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TEAD2Q15562 447 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ANKRD55Q3KP44 614 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 EMC4Q5J8M3 183 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ZNF648Q5T619 568 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 ZNF385CQ66K41 422 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 RHBDF2Q6PJF5 856 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 AGTRAPQ6RW13 159 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 DPPA4Q7L190 304 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 HMGN2P46Q86SG4 172 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 OR4D9Q8NGE8 314 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 OR6N1Q8NGY5 312 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TOMM40LQ969M1 308 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 RNF166Q96A37 237 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 PIK3IP1Q96FE7 263 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 PCED1BQ96HM7 432 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 AKR1E2Q96JD6 320 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SLC6A18Q96N87 628 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 NRIP2Q9BQI9 281 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MS4A7Q9GZW8 240 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 RBKSQ9H477 322 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 KCNK12Q9HB15 430 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 BPIFA1Q9NP55 256 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MRPL17Q9NRX2 175 aaKnown RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 SIRT3Q9NTG7 399 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 HAO2Q9NYQ3 351 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MARCH2Q9P0N8 246 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MARCH4Q9P2E8 410 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 PSG11Q9UQ72 335 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ZNF337Q9Y3M9 751 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 A0A087WWC5 75 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 UBE2L5PA0A1B0GUS4 154 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 A0A1B0GW15 77 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SLC5A10A0PJK1 596 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ZFP92A6NM28 416 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MARCH11A6NNE9 402 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 BMPR1BO00238 502 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ZNF749O43361 778 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SLCO2B1O94956 709 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SMIM17P0DL12 118 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 GABRA1P14867 456 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MMP16P51512 607 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 RHOBP62745 196 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SH3BP2P78314 561 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SSBP2P81877 361 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 IRF9Q00978 393 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 GAGE2BQ13066 116 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 COL9A2Q14055 689 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 NFATC4Q14934 902 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 CTXN3Q4LDR2 81 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 GAGE2EQ4V326 116 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TMEM128Q5BJH2 165 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 PAPPA-AS1Q5QFB9 102 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 OR8G2PQ6IF36 304 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 D2HGDHQ8N465 521 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SLC5A8Q8N695 610 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 OR52N4Q8NGI2 321 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MS4A6EQ96DS6 147 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ZNF558Q96NG5 402 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 AQP10Q96PS8 301 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 LMF1Q96S06 567 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms